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L2_047_000G1_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_84_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(114..1274)
DNA (1161bp) protein (387aa)
Uncharacterized flavoproteins n=2 Tax=Clostridiales RepID=D4MYK5_9FIRM
Uncharacterized flavoproteins
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EKY22703.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000G1_scaffold_84_2
unknown

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comp(1471..2916)
DNA (1446bp) protein (482aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
Iron only hydrogenase large subunit, C-terminal domain {ECO:0000313|EMBL:CBL37699.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CBL37699.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Iron only hydrogenase large subunit, C-terminal domain n=2 Tax=Clostridiales RepID=D4MYK4_9FIRM
L2_047_000G1_scaffold_84_3
unknown

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3278..4384
DNA (1107bp) protein (369aa)
Methionine synthase II (cobalamin-independent) (EC:2.1.1.14)
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:CBL37698.1}; EC=2.1.1.14 {ECO:0000313|EMBL:CBL37698.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Methionine synthase II (Cobalamin-independent) n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MYK3_9FIRM
L2_047_000G1_scaffold_84_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4717..6015)
DNA (1299bp) protein (433aa)
phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Enolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q3Y7_9FIRM
L2_047_000G1_scaffold_84_5
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6243..6938)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VH55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17758.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L2_047_000G1_scaffold_84_6
unknown

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comp(6956..7084)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2W2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37691.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_000G1_scaffold_84_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7207..7599)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YZ10_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
rpsI; 30S ribosomal protein S9
L2_047_000G1_scaffold_84_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7621..8055)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=4 Tax=Clostridiales RepID=D4MYJ5_9FIRM
LSU ribosomal protein L13P
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_000G1_scaffold_84_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8346..9287)
DNA (942bp) protein (314aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q502_9FIRM
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:EKY22687.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted permeases
L2_047_000G1_scaffold_84_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9277..10035)
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YXE2_9FIRM
L2_047_000G1_scaffold_84_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10042..10851)
DNA (810bp) protein (270aa)
ABC-type cobalt transport system, permease component CbiQ and related transporters n=4 Tax=Clostridiales RepID=D4MYJ2_9FIRM
ABC-type cobalt transport system, permease component CbiQ and related transporters
Cobalt transport protein {ECO:0000313|EMBL:EKY22685.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000G1_scaffold_84_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10853..11713)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ABC transporter, ATP-binding protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q3U9_9FIRM
ABC-type cobalt transport system, ATPase component
L2_047_000G1_scaffold_84_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11698..12549)
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
ABC-type cobalt transport system ATPase component n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZDD8_9FIRM
ABC-type cobalt transport system, ATPase component
L2_047_000G1_scaffold_84_14
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12695..13231)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=4 Tax=Clostridiales RepID=D4MYI9_9FIRM
LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_000G1_scaffold_84_15
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13297..14253)
DNA (957bp) protein (319aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
DNA-directed RNA polymerase subunit alpha n=5 Tax=Clostridiales RepID=D4MYI8_9FIRM
L2_047_000G1_scaffold_84_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14293..14886)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=5 Tax=Clostridiales RepID=D4MYI7_9FIRM
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_047_000G1_scaffold_84_17
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14906..15298)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=5 Tax=Clostridiales RepID=D4MYI6_9FIRM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_047_000G1_scaffold_84_18
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15421..15789)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=4 Tax=Clostridiales RepID=D4MYI5_9FIRM
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_047_000G1_scaffold_84_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16276..16494)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=5 Tax=Clostridiales RepID=D4MYI4_9FIRM
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000G1_scaffold_84_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16505..17260)
DNA (756bp) protein (252aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Methionine aminopeptidase n=5 Tax=Clostridiales RepID=D4MYI3_9FIRM
L2_047_000G1_scaffold_84_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17271..17954)
DNA (684bp) protein (228aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Adenylate kinase n=5 Tax=Clostridiales RepID=D4MYI2_9FIRM
L2_047_000G1_scaffold_84_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18065..19381)
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=3 Tax=Lachnospiraceae RepID=E5VH72_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
protein translocase subunit secY/sec61 alpha
L2_047_000G1_scaffold_84_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19383..19826)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=5 Tax=Clostridiales RepID=D4MYI0_9FIRM
LSU ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000G1_scaffold_84_24
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19854..20036)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=5 Tax=Clostridiales RepID=D4MYH9_9FIRM
LSU ribosomal protein L30P
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_047_000G1_scaffold_84_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20050..20559)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=5 Tax=Clostridiales RepID=D4MYH8_9FIRM
SSU ribosomal protein S5P
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000G1_scaffold_84_26
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20574..20942)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=5 Tax=Clostridiales RepID=D4MYH7_9FIRM
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000G1_scaffold_84_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20957..21499)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=5 Tax=Clostridiales RepID=D4MYH6_9FIRM
LSU ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_000G1_scaffold_84_28
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21587..21988)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=5 Tax=Clostridiales RepID=D4MYH5_9FIRM
Ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_047_000G1_scaffold_84_29
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22013..22198)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=5 Tax=Clostridiales RepID=D4MYH4_9FIRM
Ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_047_000G1_scaffold_84_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22213..22752)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=4 Tax=Clostridiales RepID=B0P2Y6_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
50S ribosomal protein L5
Displaying items 1-30 of 148 in total

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