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L2_047_000G1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_101_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)
Glucan 1,6-alpha-glucosidase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L253_BIFBR
alpha-glucosidase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFE90060.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_000G1_scaffold_101_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1231..2097)
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=5 Tax=Bifidobacterium RepID=B7GPB5_BIFLS
sugar ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AEF27105.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_047_000G1_scaffold_101_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2116..3066)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=3 Tax=Bifidobacterium RepID=B7GPB6_BIFLS
Raffinose transport system permease protein
Raffinose transport system permease protein {ECO:0000313|EMBL:AHJ22041.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_101_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3088..4377)
DNA (1290bp) protein (430aa)
ABC transporter, solute-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C8V5_BIFBA
Raffinose-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AEF27510.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_047_000G1_scaffold_101_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4550..5758
DNA (1209bp) protein (403aa)
ROK family protein n=5 Tax=Bifidobacterium breve RepID=F6C8V6_BIFBA
Transcriptional repressor, ROK family
ROK family protein {ECO:0000313|EMBL:ERI87804.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_000G1_scaffold_101_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5871..8186)
DNA (2316bp) protein (772aa)
Alpha-galactosidase n=2 Tax=Bifidobacterium breve RepID=F6C8V7_BIFBA
Alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:AEF26345.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_047_000G1_scaffold_101_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8303..8737)
DNA (435bp) protein (145aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=3 Tax=Bifidobacterium breve RepID=F6C8V8_BIFBA
tRNA-specific adenosine deaminase
L2_047_000G1_scaffold_101_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9188..11260
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=5 Tax=Bifidobacterium breve RepID=H3L261_BIFBR
Na+/H+ antiporter nhaP
Putative Na+/H+ antiporter {ECO:0000313|EMBL:EFE90071.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_000G1_scaffold_101_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11300..12103)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBE7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87809.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
sulfite exporter TauE/SafE domain protein
L2_047_000G1_scaffold_101_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12215..12973)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve PF4_BIFBR">RepID=S2ZPF4_BIFBR
Phospholipase/carboxylesterase
Uncharacterized protein {ECO:0000313|EMBL:EPD76245.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_101_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13031..13900)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E5W8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87811.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein
L2_047_000G1_scaffold_101_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14257..14838
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Deoxycytidine triphosphate deaminase n=2 Tax=Bifidobacterium breve RepID=U2E163_BIFBR
dcd; Deoxycytidine triphosphate deaminase
L2_047_000G1_scaffold_101_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15282..16283
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CBF1_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ22051.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_101_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16373..19363)
DNA (2991bp) protein (997aa)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTG2_BIFBR
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:ERI87815.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Calcium-transporting ATPase
L2_047_000G1_scaffold_101_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19524..19739
DNA (216bp) protein (72aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=F6C8W6_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE90079.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_000G1_scaffold_101_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19732..20244)
DNA (513bp) protein (171aa)
PTS system, glucose-specific IIABC component n=5 Tax=Bifidobacterium breve RepID=F9XZW0_BIFBU
PTS system, glucose-specific IIABC component
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EPD76251.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_101_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20354..21892)
DNA (1539bp) protein (513aa)
PTS system N-acetylglucosamine-specific IIBC components n=5 Tax=Bifidobacterium RepID=B7GPD0_BIFLS
PTS system, N-acetylglucosamine-specific IIBC component
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EPD76252.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_101_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22194..23408)
DNA (1215bp) protein (405aa)
Transporter, major facilitator family protein n=4 Tax=Bifidobacterium breve RepID=F6C8W7_BIFBA
Transporter
Transporter {ECO:0000313|EMBL:AHJ22055.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_101_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23496..24494
DNA (999bp) protein (333aa)
RNA methyltransferase, TrmH family, group 3 n=5 Tax=Bifidobacterium breve RepID=F6C8W8_BIFBA
SpoU rRNA methylase family protein
RNA methyltransferase {ECO:0000313|EMBL:BAR00920.1}; RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFE90083.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_000G1_scaffold_101_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24546..25406)
DNA (861bp) protein (287aa)
Aldose 1-epimerase n=4 Tax=Bifidobacterium RepID=F6C8W9_BIFBA
Aldose 1-epimerase family protein
Aldose 1-epimerase {ECO:0000313|EMBL:AEF27139.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_047_000G1_scaffold_101_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25461..26972)
DNA (1512bp) protein (504aa)
galT2; Galactose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Galactose-1-phosphate uridylyltransferase n=6 Tax=Bifidobacterium RepID=F6C8X0_BIFBA
L2_047_000G1_scaffold_101_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27149..28546)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C8X1_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96547.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_047_000G1_scaffold_101_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28552..29412)
DNA (861bp) protein (287aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C8X2_BIFBA
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87825.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_000G1_scaffold_101_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30000..30260)
DNA (261bp) protein (87aa)
TnpB trasposase subunit B n=5 Tax=Bifidobacterium bifidum RepID=E4P196_BIFBP
Transposase
Uncharacterized protein {ECO:0000313|EMBL:ERI87827.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_000G1_scaffold_101_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30260..30475)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BLA3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE90091.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
IS3/IS911 family transposase
L2_047_000G1_scaffold_101_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30705..31784
DNA (1080bp) protein (360aa)
Sugar-binding domain protein n=4 Tax=Bifidobacterium breve RepID=F6C8X4_BIFBA
LacI transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD76260.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_101_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31819..32787
DNA (969bp) protein (323aa)
Sugar-binding domain protein n=4 Tax=Bifidobacterium breve RepID=F6C8X5_BIFBA
periplasmic binding protein/LacI transcriptional regulator
Sugar-binding domain protein {ECO:0000313|EMBL:AEF28122.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_047_000G1_scaffold_101_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32790..34355
DNA (1566bp) protein (522aa)
ABC transporter, ATP-binding protein n=5 Tax=Bifidobacterium breve RepID=F6C8X6_BIFBA
Putative ribose transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE90094.1}; Ribose ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR00928.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_000G1_scaffold_101_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34348..35352
DNA (1005bp) protein (335aa)
Branched-chain amino acid ABC transporter, permease protein n=5 Tax=Bifidobacterium breve RepID=F6C8X7_BIFBA
ribose ABC transporter, permease protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76263.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_101_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35352..36722
DNA (1371bp) protein (457aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C8X8_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE90096.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Displaying items 1-30 of 139 in total

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