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L2_047_000G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_122_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(679..933)
DNA (255bp) protein (85aa)
YgiT-type zinc finger domain-containing protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZFJ8_BIFBR
YgiT-type zinc finger domain-containing protein {ECO:0000313|EMBL:EPD75131.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L2_047_000G1_scaffold_122_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1462..2307)
DNA (846bp) protein (282aa)
HAD hydrolase, family IIB n=2 Tax=Bifidobacterium breve RepID=F6C9M3_BIFBA
cof family hydrolase
HAD hydrolase, family IIB {ECO:0000313|EMBL:ERI88167.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_000G1_scaffold_122_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2403..3251)
DNA (849bp) protein (283aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XZP8_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95627.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_047_000G1_scaffold_122_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3445..4695)
DNA (1251bp) protein (417aa)
Glycogen synthase, Corynebacterium family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUE7_BIFBR
Glycogen synthase, Corynebacterium family {ECO:0000313|EMBL:ERI88165.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glycosyltransferase
L2_047_000G1_scaffold_122_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4824..5288)
DNA (465bp) protein (155aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DS90_BIFLD
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95625.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_047_000G1_scaffold_122_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5396..7291)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CVU2_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95624.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_047_000G1_scaffold_122_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7448..9139)
DNA (1692bp) protein (564aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E228_BIFBR
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI88162.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Solute binding protein of ABC transporter system for peptides
L2_047_000G1_scaffold_122_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9693..10796
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUE3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88160.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_047_000G1_scaffold_122_9
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10805..11422
DNA (618bp) protein (206aa)
Transcriptional regulator, LuxR family n=2 Tax=Bifidobacterium RepID=A7A3P8_BIFAD
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFI56710.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
response regulator
L2_047_000G1_scaffold_122_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11835..12494
DNA (660bp) protein (220aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZB1_BIFAA
ribAB; 3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:BAF38794.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_047_000G1_scaffold_122_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12581..14119)
DNA (1539bp) protein (513aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CCD8_BIFBR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERI88159.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamate synthase [NADPH] small chain
L2_047_000G1_scaffold_122_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14121..18692)
DNA (4572bp) protein (1524aa)
Putative glutamate synthase [NADPH], large subunit n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVT6_BIFBR
Putative glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:ERI88158.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamate synthase [NADPH] large chain
L2_047_000G1_scaffold_122_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18961..19485
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZL92_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75140.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Transcriptional regulator, LacI family
L2_047_000G1_scaffold_122_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19460..19705
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9N1_BIFBA
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AHJ21106.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_122_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19752..20780)
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium breve RepID=F6C9N2_BIFBA
Transcriptional regulator, LacI family
Transcriptional regulator {ECO:0000313|EMBL:BAQ99933.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFE89506.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_000G1_scaffold_122_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21019..21147
DNA (129bp) protein (43aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C9N3_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75143.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_122_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21490..22803)
DNA (1314bp) protein (438aa)
hemN; Coproporphyrinogen oxidase (NAD) (EC:1.3.1.-)
Coproporphyrinogen oxidase (NAD) n=2 Tax=Bifidobacterium breve RepID=F9XZN8_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:EPD75144.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_122_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22803..24683)
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Elongation factor 4 n=3 Tax=Bifidobacterium breve RepID=F6C9N5_BIFBA
GTP-binding protein lepA
L2_047_000G1_scaffold_122_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24830..25090
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=6 Tax=Bifidobacterium breve RepID=F6C9N6_BIFBA
SSU ribosomal protein S20P
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_047_000G1_scaffold_122_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25341..26111)
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BPB2_BIFBR
Hypothetical membrane spanning protein in uncharacterized protein family UPF0126
Conserved hypothetical membrane spanning protein in uncharacterized protein family UPF0126 {ECO:0000313|EMBL:ABE95613.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_047_000G1_scaffold_122_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26409..27290)
DNA (882bp) protein (294aa)
MazG family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E542_BIFBR
MazG family protein {ECO:0000313|EMBL:ERI87526.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
MazG-like protein
L2_047_000G1_scaffold_122_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27489..28616)
DNA (1128bp) protein (376aa)
Branched-chain-amino-acid transaminase n=6 Tax=Bifidobacterium breve RepID=F6C9N8_BIFBA
Branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AHJ21099.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_122_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(28840..29469)
DNA (630bp) protein (210aa)
50S ribosomal protein L25 n=6 Tax=Bifidobacterium breve RepID=F6C9N9_BIFBA
LSU ribosomal protein L25P
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_122_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29867..31150
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZFM0_BIFBR
Permease MFS superfamily
Uncharacterized protein {ECO:0000313|EMBL:EPD75151.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_000G1_scaffold_122_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31257..32681)
DNA (1425bp) protein (475aa)
pntB; NAD(P) transhydrogenase subunit beta (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
NAD(P) transhydrogenase subunit beta n=2 Tax=Bifidobacterium breve RepID=F6C9P0_BIFBA
L2_047_000G1_scaffold_122_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32681..32986)
DNA (306bp) protein (102aa)
NAD(P) transhydrogenase alpha subunit n=4 Tax=Bifidobacterium breve RepID=F9XZM9_BIFBU
NAD(P) transhydrogenase alpha subunit
NAD(P) transhydrogenase alpha subunit {ECO:0000313|EMBL:AHJ21095.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_000G1_scaffold_122_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33002..34165)
DNA (1164bp) protein (388aa)
Putative NAD(P)(+) transhydrogenase, alpha subunit n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0G5_BIFBR
Putative NAD(P)(+) transhydrogenase, alpha subunit {ECO:0000313|EMBL:ERI87532.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
pntA1; alanine dehydrogenase/PNT domain protein
L2_047_000G1_scaffold_122_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34558..36591
DNA (2034bp) protein (678aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTX7_BIFBR
fadD2; Long-chain-fatty-acid--CoA ligase
AMP-binding enzyme {ECO:0000313|EMBL:ERI87533.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_000G1_scaffold_122_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36665..37672)
DNA (1008bp) protein (336aa)
GTPase Era n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAL7_BIFBR
GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_000G1_scaffold_122_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37674..39107)
DNA (1434bp) protein (478aa)
CBS domain protein n=3 Tax=Bifidobacterium breve RepID=U2CSM4_BIFBR
Conserved hypothetical membrane spanning protein with CBS and transporter associated domains
Conserved hypothetical membrane spanning protein with CBS and transporter associated domains {ECO:0000313|EMBL:ABE95603.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Displaying items 1-30 of 107 in total

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