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L2_047_000G1_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_145_1
unknown

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1..351
DNA (351bp) protein (117aa)

This feature has no annotations

L2_047_000G1_scaffold_145_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

570..1427
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=Q039W5_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ70007.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1545..2153)
DNA (609bp) protein (203aa)
DNA-binding response regulator, CitB family (Rec-wHTH domains) n=3 Tax=Lactobacillus casei group RepID=Q039W4_LACC3
DNA-binding response regulator
DNA-binding response regulator, CitB family (Rec-wHTH domains) {ECO:0000313|EMBL:ABJ70008.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2150..3265)
DNA (1116bp) protein (372aa)
Two-component system, sensory transduction protein kinase n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LRJ4_LACPA
two-component system histidine kinase
Two-component system histidine kinase {ECO:0000313|EMBL:EPC90279.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_047_000G1_scaffold_145_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3255..4019)
DNA (765bp) protein (255aa)
ABC-type multidrug transport system, permease component n=23 Tax=Lactobacillus casei group RepID=B3WDS5_LACCB
ABC transporter
Permease component of an ABC superfamily multidrug transporter {ECO:0000313|EMBL:EKQ10571.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L2_047_000G1_scaffold_145_6
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4016..4903)
DNA (888bp) protein (296aa)
ABC-type multidrug transport system, ATPase component n=4 Tax=Lactobacillus casei group RepID=Q039W0_LACC3
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ABJ70012.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5100..6455)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=12 Tax=Lactobacillus casei group RepID=K0NAE0_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EEI67091.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
hypothetical protein
L2_047_000G1_scaffold_145_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6524..6928
DNA (405bp) protein (135aa)
Predicted transcriptional regulator n=5 Tax=Lactobacillus casei group RepID=Q039V8_LACC3
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:ABJ70014.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6921..7247
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=Q039V7_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ70015.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7447..8943
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei UCD174 RepID=K6SDF2_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EKQ19617.1}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
hypothetical protein
L2_047_000G1_scaffold_145_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8953..9966
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=Q039V5_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ70017.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_12
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9969..13082
DNA (3114bp) protein (1038aa)
Chromosome segregation ATPase n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q039V4_LACC3
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:ABJ70018.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13107..13919
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=Q039V3_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ70019.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14013..15230
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei UCD174 RepID=K6RFU8_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPC63841.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
hypothetical protein
L2_047_000G1_scaffold_145_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16053..18230
DNA (2178bp) protein (726aa)
S1 RNA-binding domain-containing transcription accessory protein n=3 Tax=Lactobacillus casei group RepID=K6SDF8_LACCA
Transcriptional accessory protein {ECO:0000313|EMBL:EPC63843.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
transcriptional accessory protein
L2_047_000G1_scaffold_145_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18655..19212)
DNA (558bp) protein (186aa)
Xre family transcriptional regulator n=8 Tax=Lactobacillus casei group RepID=C5F2X5_LACPA
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGP68110.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L2_047_000G1_scaffold_145_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19458..20069)
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=53 Tax=Lactobacillus casei group RepID=RS4_LACC3
SSU ribosomal protein S4p
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_047_000G1_scaffold_145_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20245..20727)
DNA (483bp) protein (161aa)
GAF domain-containing protein n=29 Tax=Lactobacillus casei group RepID=C5F2X3_LACPA
GAF domain protein
GAF domain-containing protein {ECO:0000313|EMBL:EPC52650.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L2_047_000G1_scaffold_145_19
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20904..22607
DNA (1704bp) protein (568aa)
Negative regulator of septation ring formation n=2 Tax=Lactobacillus casei group RepID=Q039U1_LACC3
septation ring formation regulator EzrA
Negative regulator of septation ring formation {ECO:0000313|EMBL:ABJ70031.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_145_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22916..24073
DNA (1158bp) protein (386aa)
Cysteine desulfurase {ECO:0000313|EMBL:EKQ19628.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EKQ19628.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Cysteine desulfurase n=3 Tax=Lactobacillus casei group RepID=K6RVF6_LACCA
cysteine desulfurase
L2_047_000G1_scaffold_145_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24090..25307
DNA (1218bp) protein (406aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
Probable tRNA sulfurtransferase n=17 Tax=Lactobacillus casei group RepID=THII_LACC3
thiamine biosynthesis protein ThiI
L2_047_000G1_scaffold_145_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25613..26266
DNA (654bp) protein (218aa)
Redox-sensing transcriptional repressor Rex n=38 Tax=Lactobacillus casei group RepID=B3WDW0_LACCB
CoA-binding protein
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_047_000G1_scaffold_145_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


26641..29283
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
Valine--tRNA ligase n=20 Tax=Lactobacillus casei group RepID=B3WDW1_LACCB
Valyl-tRNA synthetase
L2_047_000G1_scaffold_145_24
unknown

Not on your lists

29364..29573
DNA (210bp) protein (70aa)

This feature has no annotations

L2_047_000G1_scaffold_145_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29576..30853
DNA (1278bp) protein (426aa)
Dihydrofolate synthase / folylpolyglutamate synthase {ECO:0000313|EMBL:EKQ19632.1}; EC=6.-.-.- {ECO:0000313|EMBL:EKQ19632.1};; EC=6.3.2.12 {ECO:0000313|EMBL:EKQ19632.1};; EC=6.3.2.17 {ECO:0000313|EMBL:EKQ19632.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Dihydrofolate synthase / folylpolyglutamate synthase n=1 Tax=Lactobacillus casei UCD174 RepID=K6SDG8_LACCA
folylpolyglutamate synthase
L2_047_000G1_scaffold_145_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31047..31691
DNA (645bp) protein (215aa)
Predicted sugar phosphatase of HAD family n=4 Tax=Lactobacillus casei group RepID=Q039T5_LACC3
HAD family sugar phosphatase
HAD family sugar phosphatase {ECO:0000313|EMBL:EPC63853.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L2_047_000G1_scaffold_145_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31753..32421
DNA (669bp) protein (223aa)
DNA repair protein (RadC) n=46 Tax=Lactobacillus casei group RepID=B3WDW4_LACCB
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:EEI67210.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_047_000G1_scaffold_145_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32561..33562
DNA (1002bp) protein (334aa)
Cell shape determining protein MreB, actin-like n=54 Tax=Lactobacillus casei group RepID=B3WDW5_LACCB
Rod shape-determining protein MreB
Cell-shape determining protein {ECO:0000313|EMBL:GAN36747.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_047_000G1_scaffold_145_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33651..34511
DNA (861bp) protein (287aa)
Cell shape-determining protein MreC n=34 Tax=Lactobacillus casei group RepID=C5F2W1_LACPA
Rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_047_000G1_scaffold_145_30
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34513..35043
DNA (531bp) protein (177aa)
Rod shape-determining protein MreD n=19 Tax=Lactobacillus casei group RepID=Q039T1_LACC3
cell shape-determining protein
MreD family rod shape-determining protein {ECO:0000313|EMBL:EKQ10439.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Displaying items 1-30 of 98 in total

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