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L2_047_000G1_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_153_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..624)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLD0_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41338.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_153_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(702..3845)
DNA (3144bp) protein (1048aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30552.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative multidrug efflux pump, membrane protein
L2_047_000G1_scaffold_153_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3849..5051)
DNA (1203bp) protein (401aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UT09_CLOBO
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EES47916.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
RND family efflux transporter MFP subunit
L2_047_000G1_scaffold_153_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5369..5854
DNA (486bp) protein (162aa)
MarR-family transcriptional regulator n=2 Tax=Clostridium botulinum E RepID=B2UYU8_CLOBA
MarR-family transcriptional regulator
MarR family protein {ECO:0000313|EMBL:AIY82129.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_047_000G1_scaffold_153_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5900..7147)
DNA (1248bp) protein (416aa)
ABC transporter permease protein n=1 Tax=Clostridium botulinum B str. Eklund 17B(NRP) RepID=U4P877_CLOBO
ABC transporter permease protein {ECO:0000313|EMBL:CDH91738.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_047_000G1_scaffold_153_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7138..7878)
DNA (741bp) protein (247aa)
macrolide export ATP-binding/permease protein MacB 2 (EC:3.6.3.-)
Macrolide export ATP-binding/permease protein MacB 2 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPS0_CLOBO
ABC transporter family protein {ECO:0000313|EMBL:AIY80515.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_047_000G1_scaffold_153_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7865..9310)
DNA (1446bp) protein (482aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPR9_CLOBO
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EES49581.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
HylD family protein
L2_047_000G1_scaffold_153_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9325..10446)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035EDB6E
viral A-type inclusion protein
Putative viral A-type inclusion protein {ECO:0000313|EMBL:ACD24579.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_153_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10607..11638)
DNA (1032bp) protein (344aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TYI5_9CLOT
malR1; HTH-type transcriptional regulator MalR
Transcriptional regulator {ECO:0000313|EMBL:EKQ52207.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_047_000G1_scaffold_153_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11934..13439)
DNA (1506bp) protein (502aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
malQ1; 4-alpha-glucanotransferase MalQ (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TX79_9CLOT
L2_047_000G1_scaffold_153_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13605..14504)
DNA (900bp) protein (300aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1G4_CLOBU
Maltose/maltodextrin ABC transporter, permease protein MalG {ECO:0000313|EMBL:KJZ94278.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
binding-protein-dependent transport system inner membrane protein
L2_047_000G1_scaffold_153_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14504..15370)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A210_CLOBU
ABC transporter, permease protein {ECO:0000313|EMBL:EEP55606.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
binding-protein-dependent transport systems inner membrane component
L2_047_000G1_scaffold_153_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15517..16842)
DNA (1326bp) protein (442aa)
UPI0003D5D09A related cluster n=1 Tax=unknown RepID=UPI0003D5D09A
Maltose-binding protein {ECO:0000313|EMBL:ETI91675.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L2_047_000G1_scaffold_153_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17208..17471)
DNA (264bp) protein (88aa)
Excinuclease ABC, C subunit domain protein n=2 Tax=Clostridium butyricum RepID=M8J5W5_CLOBU
GIY-YIG domain protein {ECO:0000313|EMBL:KJZ94285.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
GIY-YIG catalytic domain protein
L2_047_000G1_scaffold_153_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17757..19412)
DNA (1656bp) protein (552aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ilvB1; acetolactate synthase large subunit IlvB (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TKP1_9CLOT
L2_047_000G1_scaffold_153_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19538..21196)
DNA (1659bp) protein (553aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
Dihydroxy-acid dehydratase n=2 Tax=Clostridium botulinum RepID=ILVD_CLOBA
L2_047_000G1_scaffold_153_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21203..22285)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QZX7_CLOBU
L2_047_000G1_scaffold_153_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22447..22935)
DNA (489bp) protein (163aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
leuD; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=4 Tax=Clostridium butyricum RepID=B1QZX6_CLOBU
L2_047_000G1_scaffold_153_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22949..24208)
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
leuC2; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridium butyricum RepID=B1QZX5_CLOBU
L2_047_000G1_scaffold_153_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24224..25819)
DNA (1596bp) protein (532aa)
Putative alpha-isopropylmalate/homocitrate synthase family transferase {ECO:0000313|EMBL:AJG96928.1}; EC=2.3.3.13 {ECO:0000313|EMBL:AJG96928.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPX3_CLOB8
alpha-isopropylmalate/homocitrate synthase family transferase
L2_047_000G1_scaffold_153_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25872..26390)
DNA (519bp) protein (173aa)
Acetolactate synthase, small subunit n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TKN8_9CLOT
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EKQ52195.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
acetolactate synthase, small subunit
L2_047_000G1_scaffold_153_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26907..27323)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UYH4_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:AIY79600.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_047_000G1_scaffold_153_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27910..30261)
DNA (2352bp) protein (784aa)
Family 31 glycosyl hydrolase, alpha-glucosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6Y6_9CLOT
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:EKQ50954.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
alpha-xylosidase YicI
L2_047_000G1_scaffold_153_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30387..31214)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Clostridium beijerinckii RepID=UPI00030A29B9
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EKQ50955.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
binding-protein-dependent transport system inner membrane protein
L2_047_000G1_scaffold_153_25
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31214..32092)
DNA (879bp) protein (293aa)
Binding-protein-dependent transport systems inner membrane component n=3 Tax=Clostridium cellulovorans RepID=D9SL49_CLOC7
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADL51565.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_047_000G1_scaffold_153_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32285..33604)
DNA (1320bp) protein (440aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVL7_9CLOT
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EKQ50957.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L2_047_000G1_scaffold_153_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33768..35639
DNA (1872bp) protein (624aa)
HAMP domain-containing protein,histidine kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXJ5_9CLOT
HAMP domain-containing protein,histidine kinase {ECO:0000313|EMBL:EKQ50958.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative sensor with HAMP domain containing protein
L2_047_000G1_scaffold_153_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35620..36393
DNA (774bp) protein (258aa)
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6Y9_9CLOT
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ50959.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
two component transcriptional regulator, AraC family
L2_047_000G1_scaffold_153_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36591..37928)
DNA (1338bp) protein (446aa)
CBS/transporter domain protein n=2 Tax=Clostridium botulinum B RepID=B2TR44_CLOBB
CBS/transporter domain protein
CBS/transporter domain protein {ECO:0000313|EMBL:ACD21727.1}; Putative modulator of ions transport {ECO:0000313|EMBL:CDH92329.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_153_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38384..39736)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
glmM; phosphoglucosamine mutase GlmM (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=B1QZX1_CLOBU
Displaying items 1-30 of 111 in total

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