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L2_047_000G1_scaffold_167

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Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_167_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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699..1529
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45129.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Fe-S oxidoreductase
L2_047_000G1_scaffold_167_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1480..1857
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KWG1_9FIRM
Radical SAM protein {ECO:0000313|EMBL:KGJ53914.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
radical SAM domain-containing protein
L2_047_000G1_scaffold_167_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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2547..3593
DNA (1047bp) protein (349aa)
Uncharacterized conserved protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8R6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ35154.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000G1_scaffold_167_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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3624..5609
DNA (1986bp) protein (662aa)
UvrABC system protein B n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1U6_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
excinuclease ABC, B subunit
L2_047_000G1_scaffold_167_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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5740..6780
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK34_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
heat-inducible transcription repressor HrcA
L2_047_000G1_scaffold_167_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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6799..7437
DNA (639bp) protein (213aa)
Protein GrpE n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQM4_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Molecular chaperone GrpE (heat shock protein)
L2_047_000G1_scaffold_167_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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7479..9356
DNA (1878bp) protein (626aa)
Chaperone protein DnaK n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R3A4_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
chaperone protein DnaK
L2_047_000G1_scaffold_167_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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9537..10709
DNA (1173bp) protein (391aa)
Chaperone protein DnaJ n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8S0_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
chaperone protein DnaJ
L2_047_000G1_scaffold_167_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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11035..12024
DNA (990bp) protein (330aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1U9_9FIRM
L2_047_000G1_scaffold_167_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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12027..12803
DNA (777bp) protein (259aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK38_9FIRM
L2_047_000G1_scaffold_167_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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12809..13960
DNA (1152bp) protein (384aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35162.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_167_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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13971..15149
DNA (1179bp) protein (393aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Probable tRNA sulfurtransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R3A8_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L2_047_000G1_scaffold_167_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(15207..15443)
DNA (237bp) protein (79aa)
HPr-related phosphotransferase system component n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1V5_9FIRM
HPr-related phosphotransferase system component {ECO:0000313|EMBL:CCZ35165.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Phosphotransferase system, HPr-related proteins
L2_047_000G1_scaffold_167_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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15775..17091
DNA (1317bp) protein (439aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK42_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CCZ35166.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_167_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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17240..17509
DNA (270bp) protein (90aa)
UPF0297 protein BN747_00614 n=3 Tax=Firmicutes RepID=R5RQN5_9FIRM
UPF0297 protein BN747_00614 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000G1_scaffold_167_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

17509..17970
DNA (462bp) protein (154aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Putative Holliday junction resolvase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R3B3_9FIRM
conserved hypothetical protein TIGR00250
L2_047_000G1_scaffold_167_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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18028..18285
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35169.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Protein of unknown function (DUF1292).
L2_047_000G1_scaffold_167_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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18316..19980
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35170.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative hydrolase of the metallo-beta-lactamase superfamily protein
L2_047_000G1_scaffold_167_19
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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19987..20328
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35171.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Protein of unknown function (DUF964).
L2_047_000G1_scaffold_167_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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20340..20810
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35172.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Predicted periplasmic solute-binding protein
L2_047_000G1_scaffold_167_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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20807..21448
DNA (642bp) protein (214aa)
O-methyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8T2_9FIRM
O-methyltransferase {ECO:0000313|EMBL:CCZ35174.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
O-methyltransferase
L2_047_000G1_scaffold_167_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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21460..22698
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35177.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
peptidase U32
L2_047_000G1_scaffold_167_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(22666..23292)
DNA (627bp) protein (209aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R3C3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
RNA polymerase, sigma 27/28 subunit, RpsK/SigK
L2_047_000G1_scaffold_167_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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23404..24933
DNA (1530bp) protein (510aa)
Mg chelatase-related protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8T7_9FIRM
Mg chelatase-related protein {ECO:0000313|EMBL:CCZ35179.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Mg chelatase-related protein
L2_047_000G1_scaffold_167_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

24948..25829
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35180.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
DNA protecting protein DprA
L2_047_000G1_scaffold_167_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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25898..27973
DNA (2076bp) protein (692aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK54_9FIRM
L2_047_000G1_scaffold_167_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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28171..28974
DNA (804bp) protein (268aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQP7_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Pleiotropic transcriptional repressor
L2_047_000G1_scaffold_167_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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29246..29530
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8U2_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Co-chaperonin GroES (HSP10)
L2_047_000G1_scaffold_167_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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29597..31219
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1X3_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
chaperonin GroL
L2_047_000G1_scaffold_167_30
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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31360..32025
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35186.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
Displaying items 1-30 of 94 in total

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