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L2_047_000G1_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_201_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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184..801
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JER1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76682.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Domain of unknown function (DUF1836).
L2_047_000G1_scaffold_201_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(899..2851)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64209.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_047_000G1_scaffold_201_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2971..5004)
DNA (2034bp) protein (678aa)
Family 31 glucosidase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FTG8_CLOPA
Family 31 glucosidase {ECO:0000313|EMBL:ETD67186.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
glycoside hydrolase family protein
L2_047_000G1_scaffold_201_4
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(5120..5962)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WFY8_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDC93107.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L2_047_000G1_scaffold_201_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5964..6863)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VG15_9FIRM
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG84533.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L2_047_000G1_scaffold_201_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(6894..8150)
DNA (1257bp) protein (419aa)
Extracellular solute-binding protein family 1 n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V7P9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDC93110.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
extracellular solute-binding protein
L2_047_000G1_scaffold_201_7
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(8370..9119)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VLQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93111.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
putative AraC family two-component system response regulator
L2_047_000G1_scaffold_201_8
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(9161..11005)
DNA (1845bp) protein (615aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003706E80
Uncharacterized protein {ECO:0000313|EMBL:CDC93112.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L2_047_000G1_scaffold_201_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11253..13454)
DNA (2202bp) protein (734aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JER0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76681.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_201_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13489..14154)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DBF3B1
Uncharacterized protein {ECO:0000313|EMBL:EES76680.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted integral membrane protein
L2_047_000G1_scaffold_201_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14352..15176)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76679.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_201_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15189..16082)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76678.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_201_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16248..17513)
DNA (1266bp) protein (422aa)
ABC-type sugar transport system n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJP2_9FIRM
ABC-type sugar transport system {ECO:0000313|EMBL:CDD78180.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_201_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17601..18662
DNA (1062bp) protein (354aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIX6_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD78179.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AraC family transcriptional regulator
L2_047_000G1_scaffold_201_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18746..20965)
DNA (2220bp) protein (740aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLE8_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDD78178.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_047_000G1_scaffold_201_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21080..22075)
DNA (996bp) protein (332aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000319BE08
Uncharacterized protein {ECO:0000313|EMBL:EES76673.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_047_000G1_scaffold_201_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22200..25382)
DNA (3183bp) protein (1061aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ1_9FIRM
L2_047_000G1_scaffold_201_18
unknown

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comp(25619..25759)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_047_000G1_scaffold_201_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25780..26085)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76671.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
TrpR-related protein YerC/YecD
L2_047_000G1_scaffold_201_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26323..27045)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76670.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Histidinol phosphatase and related hydrolases of the PHP family
L2_047_000G1_scaffold_201_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27483..28655)
DNA (1173bp) protein (391aa)
ABC transporter permease n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000309F06B
Uncharacterized protein {ECO:0000313|EMBL:EES76669.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
inner-membrane translocator
L2_047_000G1_scaffold_201_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28661..30199)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76668.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter
L2_047_000G1_scaffold_201_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30343..31410)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79902.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_047_000G1_scaffold_201_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31628..32725)
DNA (1098bp) protein (366aa)
D-xylose ABC transporter, D-xylose-binding protein n=2 Tax=Ruminococcus RepID=C6JEP5_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDD79903.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L2_047_000G1_scaffold_201_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32725..34320)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76665.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_047_000G1_scaffold_201_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34347..35828)
DNA (1482bp) protein (494aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP3_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_047_000G1_scaffold_201_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35825..36976)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76663.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type sugar transport system, periplasmic component
L2_047_000G1_scaffold_201_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37036..37788
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CNU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79909.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
polysaccharide deacetylase
L2_047_000G1_scaffold_201_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37913..38620
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76660.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted integral membrane protein
L2_047_000G1_scaffold_201_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38617..39543
DNA (927bp) protein (309aa)
TIGR01212 family radical SAM protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN8_9FIRM
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:EES76659.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
radical SAM protein, TIGR01212 family
Displaying items 1-30 of 81 in total

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