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L2_047_000G1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_223_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

406..615
DNA (210bp) protein (70aa)
Uncharacterized protein n=20 Tax=Lactobacillus casei group RepID=Q03AD3_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC22557.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
L2_047_000G1_scaffold_223_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(678..1211)
DNA (534bp) protein (178aa)
Acetyltransferase n=15 Tax=Lactobacillus casei group RepID=C5F3G5_LACPA
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:EPC51966.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_047_000G1_scaffold_223_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1480..2955)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
Sensor protein n=35 Tax=Lactobacillus casei group RepID=B3WD40_LACCB
sensor histidine kinase
L2_047_000G1_scaffold_223_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2952..3680)
DNA (729bp) protein (243aa)
Response regulator n=51 Tax=Lactobacillus casei group RepID=B3WD39_LACCB
DNA-binding response regulator, OmpR family
Putative transcriptional regulatory protein yclJ {ECO:0000313|EMBL:EPC89870.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_047_000G1_scaffold_223_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3696..4091)
DNA (396bp) protein (132aa)
Predicted integral membrane protein n=13 Tax=Lactobacillus casei group RepID=D8GFK7_LACCZ
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:BAN71273.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_047_000G1_scaffold_223_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4751..5059
DNA (309bp) protein (103aa)
Uncharacterized protein n=8 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6C3Y3_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN71272.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_047_000G1_scaffold_223_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5330..7621)
DNA (2292bp) protein (764aa)
Alpha-galactosidase {ECO:0000313|EMBL:EPC15359.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EPC15359.1};; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
Alpha-galactosidase n=7 Tax=Lactobacillus casei group RepID=K6R2B1_LACCA
alpha-galactosidase
L2_047_000G1_scaffold_223_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7898..8767)
DNA (870bp) protein (290aa)
Phospho-beta-glycosidase n=25 Tax=Lactobacillus casei group RepID=C5F3F9_LACPA
hypothetical protein
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EPC53228.1}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
L2_047_000G1_scaffold_223_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8764..9720)
DNA (957bp) protein (319aa)
Lipopolysaccharide biosynthesis glycosyltransferase n=12 Tax=Lactobacillus casei group RepID=S6BZ20_LACPA
glycosyl transferase
Lipopolysaccharide biosynthesis glycosyltransferase {ECO:0000313|EMBL:EPC53687.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_047_000G1_scaffold_223_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9721..10560)
DNA (840bp) protein (280aa)
Lipopolysaccharide biosynthesis glycosyltransferase n=9 Tax=Lactobacillus casei group RepID=Q03AE4_LACC3
glycosyl transferase
Lipopolysaccharide biosynthesis glycosyltransferase {ECO:0000313|EMBL:EPD09166.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L2_047_000G1_scaffold_223_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10557..11321)
DNA (765bp) protein (255aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=44 Tax=Lactobacillus casei group RepID=B3WD31_LACCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ11109.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L2_047_000G1_scaffold_223_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11521..12909)
DNA (1389bp) protein (463aa)
Uncharacterized transporter ydgF n=31 Tax=Lactobacillus casei group RepID=B3WD30_LACCB
APC family amino acid-polyamine-organocation transporter
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEI66967.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_047_000G1_scaffold_223_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13048..13506)
DNA (459bp) protein (153aa)
Uncharacterized protein n=9 Tax=Lactobacillus casei group RepID=S6CHM4_LACPA
LaaL
Uncharacterized protein {ECO:0000313|EMBL:BAN71265.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_047_000G1_scaffold_223_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13725..14735)
DNA (1011bp) protein (337aa)
adenine-specific methyltransferase (EC:2.1.1.72)
Adenine-specific DNA methylase n=17 Tax=Lactobacillus casei group RepID=C5F3H5_LACPA
Lactate dehydrogenase {ECO:0000313|EMBL:ERN48553.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_047_000G1_scaffold_223_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14838..15113)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=K6QLJ8_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC37962.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L2_047_000G1_scaffold_223_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15154..15615)
DNA (462bp) protein (154aa)
ComGC family competence protein n=5 Tax=Lactobacillus casei group RepID=K6RHX3_LACCA
competence protein ComGC
Competence protein ComGC {ECO:0000313|EMBL:EPC53694.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_047_000G1_scaffold_223_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15575..15895)
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2L9I4_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC62390.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
hypothetical protein
L2_047_000G1_scaffold_223_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15856..16296)
DNA (441bp) protein (147aa)
Competence protein ComGC n=8 Tax=Lactobacillus casei group RepID=S6CHM3_LACPA
competence protein ComGC
Competence protein comGC {ECO:0000313|EMBL:EPC53696.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_047_000G1_scaffold_223_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16293..16616)
DNA (324bp) protein (108aa)
Competence protein ComGC n=8 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BZ12_LACPA
competence protein ComGC
Competence protein ComGC {ECO:0000313|EMBL:EPC53697.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_047_000G1_scaffold_223_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16619..17572)
DNA (954bp) protein (318aa)
ComG operon protein 1 n=20 Tax=Lactobacillus casei group RepID=F2MA30_LACCC
type II secretory pathway/competence
Type II secretory pathway/competence component {ECO:0000313|EMBL:EPC92407.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_047_000G1_scaffold_223_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17569..18435)
DNA (867bp) protein (289aa)
Type II secretion system protein n=6 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BQC9_LACPA
type II secretory pathway protein
Type IV pilus assembly protein TapB {ECO:0000313|EMBL:EPC66968.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L2_047_000G1_scaffold_223_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18561..19292)
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein LCABL_11860 n=54 Tax=Lactobacillus casei group RepID=Y1186_LACCB
transcriptional regulatory protein
Probable transcriptional regulatory protein LBPC_0959 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_047_000G1_scaffold_223_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19363..19854)
DNA (492bp) protein (164aa)
Conserved domain protein n=34 Tax=Lactobacillus casei group RepID=B3WD19_LACCB
Hypothetical protein
VanZ-like protein {ECO:0000313|EMBL:EEI66890.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_047_000G1_scaffold_223_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19929..21734
DNA (1806bp) protein (602aa)
Oligoendopeptidase F n=10 Tax=Lactobacillus casei group RepID=S6BIP8_LACPA
Oligoendopeptidase F {ECO:0000313|EMBL:BAN71253.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
oligoendopeptidase
L2_047_000G1_scaffold_223_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21824..21964
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2MK79_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC15341.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L2_047_000G1_scaffold_223_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21942..23753)
DNA (1812bp) protein (604aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=39 Tax=Lactobacillus casei group RepID=B3WD17_LACCB
glutamine--fructose-6-phosphate transaminase
L2_047_000G1_scaffold_223_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24067..25431)
DNA (1365bp) protein (455aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Phosphoglucosamine mutase n=50 Tax=Lactobacillus casei group RepID=GLMM_LACC3
Phosphoglucosamine mutase
L2_047_000G1_scaffold_223_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25453..26538)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=7 Tax=Lactobacillus casei group RepID=S6CHM1_LACPA
YbbR-like domain-containing protein ybbR {ECO:0000313|EMBL:EPC66974.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
hypothetical protein
L2_047_000G1_scaffold_223_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26535..27392)
DNA (858bp) protein (286aa)
YbbP protein n=50 Tax=Lactobacillus casei group RepID=C5F3J0_LACPA
hypothetical protein
DisA family nucleotide-binding protein {ECO:0000313|EMBL:EKQ11092.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L2_047_000G1_scaffold_223_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27656..28390
DNA (735bp) protein (245aa)
ABC transporter-like protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2PEU9_LACPA
ABC transporter ATP-binding protein
ABC transporter-like protein {ECO:0000313|EMBL:EPC50860.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
Displaying items 1-30 of 82 in total

View Taxonomy