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L2_047_000G1_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_226_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8W0_9FIRM
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EDP22268.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
phage/plasmid primase, P4 family, C-terminal domain
L2_047_000G1_scaffold_226_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(314..916)
DNA (603bp) protein (201aa)
CHC2 zinc finger domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8W3_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EDP22269.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
DNA primase (bacterial type)
L2_047_000G1_scaffold_226_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1246..1371
DNA (126bp) protein (42aa)
Predicted transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC7_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK99376.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1368..2183
DNA (816bp) protein (272aa)
Predicted transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1A1_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL00050.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2473..4086)
DNA (1614bp) protein (538aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1H6_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL00125.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_000G1_scaffold_226_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4216..5466)
DNA (1251bp) protein (417aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1H7_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase)
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CBL00126.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5880..6797
DNA (918bp) protein (306aa)
Helix-turn-helix n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1I0_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL00129.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6789..7355)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1I1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00130.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7956..9602
DNA (1647bp) protein (549aa)
RND family efflux transporter, MFP subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY5_9FIRM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CBK98884.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9599..10357
DNA (759bp) protein (253aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK98883.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK98883.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY4_9FIRM
L2_047_000G1_scaffold_226_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10354..11553
DNA (1200bp) protein (400aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY3_9FIRM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CBK98882.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11564..13714
DNA (2151bp) protein (717aa)
S-layer homology domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY2_9FIRM
S-layer homology domain.
S-layer homology domain {ECO:0000313|EMBL:CBK98881.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13854..14564
DNA (711bp) protein (237aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK98880.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14561..15841
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98879.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16066..19179
DNA (3114bp) protein (1038aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9B5_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDP22198.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Beta-glucosidase-related glycosidases
L2_047_000G1_scaffold_226_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19254..21677
DNA (2424bp) protein (808aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBK98877.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBK98877.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Beta-glucosidase-related glycosidases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX8_9FIRM
L2_047_000G1_scaffold_226_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21691..22242
DNA (552bp) protein (184aa)
GtrA-like protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K902_9FIRM
GtrA-like protein.
GtrA-like protein {ECO:0000313|EMBL:CBL01315.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000G1_scaffold_226_18
unknown

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comp(22143..22481)
DNA (339bp) protein (113aa)

This feature has no annotations

L2_047_000G1_scaffold_226_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22493..24118)
DNA (1626bp) protein (542aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX5_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK98874.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24754..26358)
DNA (1605bp) protein (535aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBK98872.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX3_9FIRM
L2_047_000G1_scaffold_226_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26821..27474
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98871.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28039..29100
DNA (1062bp) protein (354aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CBK98870.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CBK98870.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Tryptophanyl-tRNA synthetase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX1_9FIRM
L2_047_000G1_scaffold_226_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29167..30951)
DNA (1785bp) protein (595aa)
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Threonine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW8_9FIRM
L2_047_000G1_scaffold_226_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31832..33100)
DNA (1269bp) protein (423aa)
Chloride channel protein EriC n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW6_9FIRM
Chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:CBK98865.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33299..33511)
DNA (213bp) protein (71aa)
Nitrogen regulatory protein P-II n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFN4_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFQ08012.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
AmtB; ammonia permease
L2_047_000G1_scaffold_226_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33792..34160)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08011.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Protein of unknown function (DUF1622).
L2_047_000G1_scaffold_226_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34175..34813)
DNA (639bp) protein (213aa)
Ribose 5-phosphate isomerase RpiB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW5_9FIRM
Ribose 5-phosphate isomerase RpiB
Ribose 5-phosphate isomerase RpiB {ECO:0000313|EMBL:CBK98864.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34954..35763)
DNA (810bp) protein (270aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBK98863.1}; EC=1.1.1.69 {ECO:0000313|EMBL:CBK98863.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW4_9FIRM
L2_047_000G1_scaffold_226_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36037..36810)
DNA (774bp) protein (258aa)
Short-chain dehydrogenases of various substrate specificities n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW3_9FIRM
Short-chain dehydrogenases of various substrate specificities
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CBK98862.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_226_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36814..36933)
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98861.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 85 in total

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