ggKbase home page

L2_047_000G1_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_230_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

L2_047_000G1_scaffold_230_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

451..774
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80585.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_047_000G1_scaffold_230_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(857..1231)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80586.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted transcriptional regulator
L2_047_000G1_scaffold_230_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1580..2221)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80587.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acetyltransferases
L2_047_000G1_scaffold_230_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2286..4400)
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76273.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Peptidase family M28.
L2_047_000G1_scaffold_230_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4636..6744
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76272.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_230_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6741..7634
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFT8_9FIRM
Membrane protein {ECO:0000313|EMBL:CDD80591.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_230_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7622..9460
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76270.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_230_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9466..10656
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80594.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glycosyl transferase (group 1)
L2_047_000G1_scaffold_230_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10889..12358
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76268.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_230_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12345..14138
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80596.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
membrane lipoprotein lipid attachment site
L2_047_000G1_scaffold_230_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14125..14877
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CT20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80598.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_230_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14874..15545
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80600.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative membrane spanning protein
L2_047_000G1_scaffold_230_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15538..16944
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80602.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_230_15
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17182..17745
DNA (564bp) protein (188aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LGT6_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:CBL19047.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_047_000G1_scaffold_230_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17752..18153
DNA (402bp) protein (134aa)
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6A6_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component {ECO:0000313|EMBL:CCY32497.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L2_047_000G1_scaffold_230_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18216..18698)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76252.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted metal-binding protein (DUF2284).
L2_047_000G1_scaffold_230_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18893..19471
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76249.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator
L2_047_000G1_scaffold_230_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19702..20847
DNA (1146bp) protein (382aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR5_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:EES76248.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_230_20
Cyanobacterium stanieri, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20877..21143)
DNA (267bp) protein (89aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YKJ0_CYASC
Txe/YoeB family addiction module toxin
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:AFZ46915.1}; TaxID=292563 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).;"
L2_047_000G1_scaffold_230_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21136..21408)
DNA (273bp) protein (91aa)
DNA damage-inducible protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQR2_9FIRM
DNA damage-inducible protein {ECO:0000313|EMBL:CCZ78079.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RelB/DinJ family addiction module antitoxin
L2_047_000G1_scaffold_230_22
unknown

Not on your lists

21643..21780
DNA (138bp) protein (46aa)

This feature has no annotations

L2_047_000G1_scaffold_230_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21770..22393
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76247.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_230_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22473..23699
DNA (1227bp) protein (409aa)
Serine/threonine transporter SstT n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL4_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Na+/serine symporter
L2_047_000G1_scaffold_230_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23835..24086
DNA (252bp) protein (84aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRZ2_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDD80218.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage III sporulation protein D.
L2_047_000G1_scaffold_230_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24194..25030
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76224.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative esterase
L2_047_000G1_scaffold_230_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

25275..26777
DNA (1503bp) protein (501aa)
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase 2 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGD3_9FIRM
Alpha-N-arabinofuranosidase 2 {ECO:0000313|EMBL:CDC44414.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_047_000G1_scaffold_230_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26909..27181
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76220.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_230_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27142..29106
DNA (1965bp) protein (655aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEP8_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD76566.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_230_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29203..30126)
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF38_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD76565.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 176 in total

View Taxonomy