ggKbase home page

L2_047_000G1_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_233_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

318..1583
DNA (1266bp) protein (422aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAC8_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL01791.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000G1_scaffold_233_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2113..2331)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21003.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000G1_scaffold_233_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3042..3674
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SDU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21002.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Putative transposase, YhgA-like.
L2_047_000G1_scaffold_233_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4238..5146)
DNA (909bp) protein (303aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:CBK98620.1}; EC=4.1.3.4 {ECO:0000313|EMBL:CBK98620.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K527_9FIRM
L2_047_000G1_scaffold_233_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5286..6479)
DNA (1194bp) protein (398aa)
Predicted acyl-CoA transferases/carnitine dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K526_9FIRM
Predicted acyl-CoA transferases/carnitine dehydratase
Predicted acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:CBK98619.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6523..7854)
DNA (1332bp) protein (444aa)
Di-and tricarboxylate transporters n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K525_9FIRM
Di-and tricarboxylate transporters
Di-and tricarboxylate transporters {ECO:0000313|EMBL:CBK98618.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8111..10027)
DNA (1917bp) protein (639aa)
PAS domain S-box n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K524_9FIRM
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:CBK98617.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10227..11522
DNA (1296bp) protein (432aa)
RNA polymerase sigma-54 factor n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K523_9FIRM
RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CBK98616.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11537..11926
DNA (390bp) protein (130aa)
Uncharacterized domain 1 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K522_9FIRM
uncharacterized domain 1
Uncharacterized domain 1 {ECO:0000313|EMBL:CBK98615.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12190..13845)
DNA (1656bp) protein (552aa)
ABC-type Fe3+ transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K521_9FIRM
ABC-type Fe3+ transport system, permease component
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:CBK98614.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13832..14920)
DNA (1089bp) protein (363aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.30)
ABC-type spermidine/putrescine transport systems, ATPase components {ECO:0000313|EMBL:CBK98613.1}; EC=3.6.3.30 {ECO:0000313|EMBL:CBK98613.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type spermidine/putrescine transport systems, ATPase components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K520_9FIRM
L2_047_000G1_scaffold_233_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14945..16033)
DNA (1089bp) protein (363aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K519_9FIRM
ABC-type Fe3+ transport system, periplasmic component
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:CBK98612.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16171..16947)
DNA (777bp) protein (259aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K518_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CBK98611.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16951..18201)
DNA (1251bp) protein (417aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K517_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase {ECO:0000313|EMBL:CBK98610.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18241..18651)
DNA (411bp) protein (137aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K517_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase {ECO:0000313|EMBL:CBK98610.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18828..19673)
DNA (846bp) protein (282aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K516_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK98609.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20168..21523
DNA (1356bp) protein (452aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K514_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK98607.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_18
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21632..22558
DNA (927bp) protein (309aa)
ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PYF5_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC29463.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_233_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22574..23542
DNA (969bp) protein (323aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K513_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK98606.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23718..24647
DNA (930bp) protein (310aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:CBK98605.1}; EC=4.1.3.3 {ECO:0000313|EMBL:CBK98605.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K512_9FIRM
L2_047_000G1_scaffold_233_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24747..25205
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K511_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98604.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25205..25915
DNA (711bp) protein (237aa)
Putative N-acetylmannosamine-6-phosphate epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235, ECO:0000313|EMBL:CBK98603.1};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K510_9FIRM
L2_047_000G1_scaffold_233_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25931..26860
DNA (930bp) protein (310aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CBK98602.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CBK98602.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Transcriptional regulator/sugar kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K509_9FIRM
L2_047_000G1_scaffold_233_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26875..27513
DNA (639bp) protein (213aa)
Lysophospholipase L1 and related esterases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K508_9FIRM
Lysophospholipase L1 and related esterases
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CBK98601.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27809..28519
DNA (711bp) protein (237aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K507_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK98600.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_233_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28516..29811
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30695.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
two-component sensor kinase
L2_047_000G1_scaffold_233_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30336..32255
DNA (1920bp) protein (640aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBK98599.1}; EC=3.2.1.23 {ECO:0000313|EMBL:CBK98599.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Beta-galactosidase/beta-glucuronidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K506_9FIRM
L2_047_000G1_scaffold_233_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32368..35619
DNA (3252bp) protein (1084aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90205.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
bgl3A; beta-glucosidase Bgl3A
L2_047_000G1_scaffold_233_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35621..36058
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61549.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_047_000G1_scaffold_233_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36161..37726
DNA (1566bp) protein (522aa)
Na+/melibiose symporter and related transporters n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K505_9FIRM
Na+/melibiose symporter and related transporters
Na+/melibiose symporter and related transporters {ECO:0000313|EMBL:CBK98598.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 74 in total

View Taxonomy