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L2_047_000G1_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_276_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(806..1978)
DNA (1173bp) protein (391aa)
Transcriptional regulator, PucR family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M3T6_9CLOT
Transcriptional regulator, PucR family {ECO:0000313|EMBL:EHJ00554.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
PucR family transcriptional regulator
L2_047_000G1_scaffold_276_2
unknown

Not on your lists

comp(2181..2312)
DNA (132bp) protein (44aa)

This feature has no annotations

L2_047_000G1_scaffold_276_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2530..3792)
DNA (1263bp) protein (421aa)
Beta-ureidopropionase {ECO:0000313|EMBL:KJZ84336.1}; EC=3.5.1.6 {ECO:0000313|EMBL:KJZ84336.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPA1_9FIRM
L2_047_000G1_scaffold_276_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4033..4419)
DNA (387bp) protein (129aa)
Lactoylglutathione lyase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MCR6_9CLOT
lactoylglutathione lyase
Lactoylglutathione lyase {ECO:0000313|EMBL:AGF55694.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_276_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4464..5426)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KK03_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42575.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_047_000G1_scaffold_276_6
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5430..5759)
DNA (330bp) protein (110aa)
TfoX domain-containing protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F015_CLOSG
TfoX domain-containing protein {ECO:0000313|EMBL:EHN15006.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
TfoX domain-containing protein
L2_047_000G1_scaffold_276_7
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5877..6713)
DNA (837bp) protein (279aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1THX4_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGD45995.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
AraC family transcriptional regulator
L2_047_000G1_scaffold_276_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7167..8318
DNA (1152bp) protein (384aa)
aminotransferase (EC:2.6.1.-)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U348_9CLOT
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:EKQ55526.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_047_000G1_scaffold_276_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8465..8998
DNA (534bp) protein (178aa)
Putative membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U492_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EKQ55527.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
membrane spanning protein
L2_047_000G1_scaffold_276_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9110..9790)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIV9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32072.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_047_000G1_scaffold_276_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9951..10625
DNA (675bp) protein (225aa)
Cyclic nucleotide-binding protein n=2 Tax=Clostridium butyricum RepID=M8JD89_CLOBU
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KHD14764.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
CRP (cyclic AMP receptor protein) regulatory protein
L2_047_000G1_scaffold_276_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11059..11337)
DNA (279bp) protein (93aa)
UPI0003D6399E related cluster n=1 Tax=unknown RepID=UPI0003D6399E
Uncharacterized protein {ECO:0000313|EMBL:KJZ89157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transposase IS4 family protein
L2_047_000G1_scaffold_276_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11445..11780
DNA (336bp) protein (112aa)
Transposase IS3/IS911 family protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHZ8_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:KHD13719.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transposase IS3/IS911 family protein
L2_047_000G1_scaffold_276_14

Not on your lists

11791..11991
DNA (201bp) protein (67aa)
Transposase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EJ64_CLOPA
Transposase {ECO:0000313|EMBL:ETJ35585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
nisX2; transposase for insertion sequence element IS904
L2_047_000G1_scaffold_276_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12199..13782)
DNA (1584bp) protein (528aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Dorea sp. CAG:317 RepID=R6XLD4_9FIRM
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CDD07132.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ram2; alpha-L-rhamnosidase
L2_047_000G1_scaffold_276_16
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13791..15068)
DNA (1278bp) protein (426aa)
Disaccharride transporter, major facilitator super family (MFS) n=1 Tax=Lactobacillus plantarum ZJ316 RepID=M4KDB3_LACPN
sugar transport protein
RamP2 protein {ECO:0000313|EMBL:AGE37643.1}; TaxID=1284663 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum ZJ316.;"
L2_047_000G1_scaffold_276_17
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(15085..15315)
DNA (231bp) protein (77aa)
Phosphotransferase system HPr-related proteins n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CGA2_9FIRM
Phosphotransferase system HPr-related proteins {ECO:0000313|EMBL:CDA64302.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Phosphotransferase system, HPr-related proteins
L2_047_000G1_scaffold_276_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15337..16686)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RLB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18204.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
major facilitator superfamily protein
L2_047_000G1_scaffold_276_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17027..18070
DNA (1044bp) protein (348aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RLB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18203.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
transcriptional regulator AraC family
L2_047_000G1_scaffold_276_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18356..19648)
DNA (1293bp) protein (431aa)
Uracil permease n=3 Tax=Clostridium butyricum RepID=B1R0P8_CLOBU
Uracil permease {ECO:0000313|EMBL:KJZ84018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uracil transporter
L2_047_000G1_scaffold_276_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20280..20924
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52689.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_047_000G1_scaffold_276_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21024..21248
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002EF5739
Uncharacterized protein {ECO:0000313|EMBL:EHI99967.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_276_23
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21290..21508
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M190_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99966.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_276_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21760..21945
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TKK3_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23450.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_276_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22201..22932)
DNA (732bp) protein (244aa)
Putative NADH-flavin reductase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56209.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative NADH-flavin reductase
L2_047_000G1_scaffold_276_26
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22974..23297
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C0D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58362.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hxlR-like helix-turn-helix family protein
L2_047_000G1_scaffold_276_27
unknown

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23301..23426
DNA (126bp) protein (42aa)

This feature has no annotations

L2_047_000G1_scaffold_276_28
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23502..24902)
DNA (1401bp) protein (467aa)
Glycoside hydrolase family protein n=1 Tax=Clostridium intestinale URNW RepID=U2N2Q8_9CLOT
Glycoside hydrolase family protein {ECO:0000313|EMBL:ERK29797.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
6-phospho-beta-glucosidase
L2_047_000G1_scaffold_276_29
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24930..26231)
DNA (1302bp) protein (434aa)
Cellobiose permease IIC component CelB n=1 Tax=Clostridium intestinale URNW RepID=U2PTQ5_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
PTS sugar transporter subunit IIA
L2_047_000G1_scaffold_276_30
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26246..27535)
DNA (1290bp) protein (430aa)
Glycoside hydrolase family 1 n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q8S4_CALH1
glycoside hydrolase family 1
Glycoside hydrolase family 1 {ECO:0000313|EMBL:ADQ08048.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
Displaying items 1-30 of 143 in total

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