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L2_047_000G1_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_297_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

L2_047_000G1_scaffold_297_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(415..1719)
DNA (1305bp) protein (435aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Clostridium leptum CAG:27 RepID=R6NGT9_9CLOT
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:CDC05431.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_047_000G1_scaffold_297_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1823..2641)
DNA (819bp) protein (273aa)
Dipeptidyl-peptidase 6 {ECO:0000313|EMBL:EDN01378.1}; EC=3.4.22.- {ECO:0000313|EMBL:EDN01378.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Dipeptidyl-peptidase 6 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQN2_9FIRM
NLP/P60 protein
L2_047_000G1_scaffold_297_4
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(2651..3442)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92258.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
beta-lactamase class A
L2_047_000G1_scaffold_297_5
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(3439..4362)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92260.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
peptidase S66
L2_047_000G1_scaffold_297_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(4436..5374)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92261.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
oppF; oligopeptide ABC transporter (ATP-binding protein)
L2_047_000G1_scaffold_297_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(5364..6413)
DNA (1050bp) protein (350aa)
peptide ABC transporter ATPase (EC:3.6.3.24)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIJ6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX92263.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L2_047_000G1_scaffold_297_8
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6427..7428)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CSI8_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EXG83533.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L2_047_000G1_scaffold_297_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7428..8381)
DNA (954bp) protein (318aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4J5_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU97177.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_047_000G1_scaffold_297_10
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

comp(8520..10460)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CG46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66658.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
family 5 extracellular solute-binding protein
L2_047_000G1_scaffold_297_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10590..11678)
DNA (1089bp) protein (363aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4S8_CLOSW
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:KJF41403.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
mandelate racemase/muconate lactonizing protein
L2_047_000G1_scaffold_297_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12028..13029
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2B9M2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33063.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_000G1_scaffold_297_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13094..13756
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56470.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Predicted membrane protein
L2_047_000G1_scaffold_297_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(13819..14550)
DNA (732bp) protein (244aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATM0_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CCX46333.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
OmpR family two-component response regulator
L2_047_000G1_scaffold_297_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(14547..15545)
DNA (999bp) protein (333aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative two-component histidine kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWI6_9FIRM
L2_047_000G1_scaffold_297_16
unknown

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15574..15993
DNA (420bp) protein (140aa)

This feature has no annotations

L2_047_000G1_scaffold_297_17
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16147..17292)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V763_CLOSS
CaiA; acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAK48491.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L2_047_000G1_scaffold_297_18
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(17337..17810)
DNA (474bp) protein (158aa)
Acyl dehydratase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T7R6_9EURY
Acyl dehydratase {ECO:0000313|EMBL:EMR74869.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
acyl dehydratase
L2_047_000G1_scaffold_297_19
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17849..18325)
DNA (477bp) protein (159aa)
Acyl dehydratase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I8S1_9FIRM
acyl dehydratase
Acyl dehydratase {ECO:0000313|EMBL:AGL00672.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L2_047_000G1_scaffold_297_20
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18377..19567)
DNA (1191bp) protein (397aa)
Formyl-CoA transferase (EC:2.8.3.16)
CoA-transferase family III protein n=2 Tax=Peptostreptococcus anaerobius RepID=D3MSM5_9FIRM
CoA-transferase family III protein {ECO:0000313|EMBL:EFD04809.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
L2_047_000G1_scaffold_297_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19686..20351)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0I4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99045.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_297_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20372..21076)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99044.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_297_23
Acidaminococcus sp. CAG:542, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(21113..22219)
DNA (1107bp) protein (369aa)
Peptidase T-like protein n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7M1E1_9FIRM
Peptidase T-like protein {ECO:0000313|EMBL:CDE93728.1}; TaxID=1262687 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:542.;"
peptidase T-like protein
L2_047_000G1_scaffold_297_24
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(22570..23982)
DNA (1413bp) protein (471aa)
Sigma-54 interaction domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPM9_FUSVA
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EES63240.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
sigma54 specific transcriptional regulator, Fis family
L2_047_000G1_scaffold_297_25
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

25055..25426
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNF8_TREPZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF84339.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
L2_047_000G1_scaffold_297_26
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

25514..25891
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNF9_TREPZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF83872.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
L2_047_000G1_scaffold_297_27
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

25903..26910
DNA (1008bp) protein (336aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNG0_TREPZ
oxidoreductase, aldo/keto reductase family
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:AEF84455.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
L2_047_000G1_scaffold_297_28
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26968..28611
DNA (1644bp) protein (548aa)
Oligopeptide ABC transporter substrate-binding protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNF7_TREPZ
oligopeptide ABC transporter substrate-binding protein
Oligopeptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEF86352.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
L2_047_000G1_scaffold_297_29
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

28738..29508
DNA (771bp) protein (257aa)
Oligopeptide transport system permease protein AppB n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNF5_TREPZ
oligopeptide transport system permease AppB
Oligopeptide transport system permease protein AppB {ECO:0000313|EMBL:AEF83849.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
L2_047_000G1_scaffold_297_30
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

29502..29702
DNA (201bp) protein (67aa)
Oligopeptide transport system permease protein AppB n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNF5_TREPZ
oligopeptide transport system permease AppB
Oligopeptide transport system permease protein AppB {ECO:0000313|EMBL:AEF83849.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
Displaying items 1-30 of 71 in total

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