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L2_047_000G1_scaffold_333

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_333_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61..477)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83492.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protein of unknown function (DUF2992).
L2_047_000G1_scaffold_333_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

681..2630
DNA (1950bp) protein (650aa)
Resolvase N-terminal domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I890_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CCY32976.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
site-specific recombinase, DNA invertase Pin-like protein
L2_047_000G1_scaffold_333_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2620..3174
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76828.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_047_000G1_scaffold_333_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3582..4694
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76829.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_333_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4839..5927
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76830.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_333_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6117..7175)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LV90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98729.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type sulfate/molybdate transport systems, ATPase component
L2_047_000G1_scaffold_333_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7175..7870)
DNA (696bp) protein (232aa)
Molybdate ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR07_9FIRM
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:CDD80107.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
molybdate ABC transporter, permease protein
L2_047_000G1_scaffold_333_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7873..8772)
DNA (900bp) protein (300aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDT3_9FIRM
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EES76832.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L2_047_000G1_scaffold_333_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9152..9364
DNA (213bp) protein (71aa)
Molybdenum-pterin binding domain-containing protein n=2 Tax=Ruminococcus RepID=C6JDT4_9FIRM
Molybdenum-pterin-binding protein {ECO:0000313|EMBL:CDD80109.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Molybdopterin-binding protein
L2_047_000G1_scaffold_333_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9357..10295
DNA (939bp) protein (313aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Ruminococcus RepID=C6JDT5_9FIRM
Periplasmic molybdate-binding protein {ECO:0000313|EMBL:CDD80111.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA binding domain, excisionase family
L2_047_000G1_scaffold_333_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10385..11401)
DNA (1017bp) protein (339aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=2 Tax=Ruminococcus RepID=C6JDT6_9FIRM
L2_047_000G1_scaffold_333_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11574..14789)
DNA (3216bp) protein (1072aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDT7_9FIRM
L2_047_000G1_scaffold_333_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14789..15865)
DNA (1077bp) protein (359aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR17_9FIRM
L2_047_000G1_scaffold_333_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16414..17541)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80120.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acetylmuramoyl-L-alanine amidase
L2_047_000G1_scaffold_333_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17697..19202)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80121.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acetylmuramoyl-L-alanine amidase
L2_047_000G1_scaffold_333_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19341..19928)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76840.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_333_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19984..21402)
DNA (1419bp) protein (473aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU2_9FIRM
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:EES76841.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_047_000G1_scaffold_333_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21616..23031)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80126.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_047_000G1_scaffold_333_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23228..24172)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80127.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_047_000G1_scaffold_333_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24261..25682)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76844.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cell envelope-related function transcriptional attenuator common domain
L2_047_000G1_scaffold_333_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25700..27103)
DNA (1404bp) protein (468aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU6_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EES76845.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Undecaprenyl-phosphate glucose phosphotransferase
L2_047_000G1_scaffold_333_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27187..28143)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76846.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyltransferases
L2_047_000G1_scaffold_333_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28125..30032)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76847.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyltransferases
L2_047_000G1_scaffold_333_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30105..30236
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LK10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98798.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_333_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30348..31628
DNA (1281bp) protein (427aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76848.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_333_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31735..33195)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76849.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein (DUF2142).
L2_047_000G1_scaffold_333_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33214..35658)
DNA (2445bp) protein (815aa)
Glycosyl transferase n=1 Tax=Ruminococcus sp. CAG:9 PF3_9FIRM">RepID=R7CPF3_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:CDD80134.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted glycosyltransferases
L2_047_000G1_scaffold_333_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35660..38203)
DNA (2544bp) protein (848aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76851.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyltransferases
L2_047_000G1_scaffold_333_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38170..40362)
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76852.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Dimethyladenosine transferase (rRNA methylation)
L2_047_000G1_scaffold_333_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40418..41698)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80139.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Displaying items 1-30 of 69 in total

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