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L2_047_000G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_358_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

159..2747
DNA (2589bp) protein (863aa)
Family 8 polysaccharide lyase {ECO:0000313|EMBL:EKQ16736.1}; EC=4.-.-.- {ECO:0000313|EMBL:EKQ16736.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
family 8 polysaccharide lyase (EC:4.-.-.-)
Family 8 polysaccharide lyase n=1 Tax=Lactobacillus casei UCD174 RepID=K6R7P6_LACCA
L2_047_000G1_scaffold_358_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3004..3630
DNA (627bp) protein (209aa)
PTS system maltose-and glucose-specific EIICB component {ECO:0000313|EMBL:CCK23766.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCK23766.1};; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
PTS system, alpha-glucoside-specific IIbc component n=2 Tax=Lactobacillus casei RepID=D8GDJ2_LACCZ
malX; hypothetical protein
L2_047_000G1_scaffold_358_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3578..4609
DNA (1032bp) protein (344aa)
PTS system, maltose and glucose-specific IICB components n=4 Tax=Lactobacillus casei group RepID=K6Q8K5_LACCA
PTS system maltose-and glucose-specific EIICB component {ECO:0000313|EMBL:EPC84863.1}; Flags: Fragment;; TaxID=1256211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4649.;"
malX; hypothetical protein
L2_047_000G1_scaffold_358_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4745..5965
DNA (1221bp) protein (407aa)
Mannose-6-phosphate isomerase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp70 RepID=S2UL85_LACPA
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EPD09052.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
mannose-6-phosphate isomerase
L2_047_000G1_scaffold_358_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6862..7173
DNA (312bp) protein (104aa)
Uncharacterized protein n=8 Tax=Lactobacillus casei group RepID=Q034H0_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI69543.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_047_000G1_scaffold_358_6
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7401..7493)
DNA (93bp) protein (31aa)
Predicted holin-like toxin n=8 Tax=Lactobacillus casei group RepID=Q034H1_LACC3
holin-like toxin
Uncharacterized protein {ECO:0000313|EMBL:ERN49724.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_047_000G1_scaffold_358_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8018..8764
DNA (747bp) protein (249aa)
Uncharacterized transcriptional regulatory protein ykoG n=1 Tax=Lactobacillus casei W56 RepID=K0NDB2_LACCA
ykoG; transcriptional regulatory protein ykoG
Uncharacterized transcriptional regulatory protein ykoG {ECO:0000313|EMBL:CCK23764.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L2_047_000G1_scaffold_358_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8819..10171
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
Signal transduction histidine kinase n=3 Tax=Lactobacillus casei group RepID=Q034H3_LACC3
Signal transduction histidine kinase
L2_047_000G1_scaffold_358_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10380..11036
DNA (657bp) protein (219aa)
DedA family protein n=2 Tax=Lactobacillus casei group RepID=K6RVK9_LACCA
DedA family protein {ECO:0000313|EMBL:EKQ16730.1}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
DedA protein
L2_047_000G1_scaffold_358_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11026..11697
DNA (672bp) protein (224aa)
Membrane-associated phospholipid phosphatase n=2 Tax=Lactobacillus casei RepID=Q034H5_LACC3
membrane-associated phospholipid phosphatase
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:ABJ71397.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_358_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11699..12640
DNA (942bp) protein (314aa)
Glycosyltransferase related enzyme n=2 Tax=Lactobacillus casei group RepID=Q034H6_LACC3
glycosyltransferase-like protein
Glycosyltransferase related enzyme {ECO:0000313|EMBL:ABJ71396.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_358_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12652..14616
DNA (1965bp) protein (655aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=K6S547_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPD09043.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
Hypothetical protein
L2_047_000G1_scaffold_358_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14774..15463
DNA (690bp) protein (230aa)
ribose 5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
Ribose-5-phosphate isomerase A n=26 Tax=Lactobacillus casei group RepID=RPIA_LACC3
L2_047_000G1_scaffold_358_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15532..16176
DNA (645bp) protein (215aa)
DNA-7-methylguanine glycosylase {ECO:0000313|EMBL:ABJ71393.1}; EC=3.2.2.- {ECO:0000313|EMBL:ABJ71393.1};; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
DNA-7-methylguanine glycosylase n=2 Tax=Lactobacillus casei RepID=Q034H9_LACC3
DNA alkylation repair protein
L2_047_000G1_scaffold_358_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16279..17298)
DNA (1020bp) protein (340aa)
kdgK; 2-dehydro-3-deoxygluconokinase (EC:2.7.1.45)
2-keto-3-deoxy-phosphogluconate aldolase n=16 Tax=Lactobacillus casei group RepID=Q034I0_LACC3
2-keto-3-deoxy-6-phosphogluconate aldolase and 2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EPC90242.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_047_000G1_scaffold_358_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17303..17956)
DNA (654bp) protein (218aa)
2-dehydro-3-deoxyphosphogluconate aldolase / 2-dehydro-3-deoxygluconate kinase {ECO:0000313|EMBL:EKQ16723.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EKQ16723.1};; EC=4.1.2.14 {ECO:0000313|EMBL:EKQ16723.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
2-dehydro-3-deoxyphosphogluconate aldolase / 2-dehydro-3-deoxygluconate kinase (EC:4.1.2.14 2.7.1.45)
2-dehydro-3-deoxyphosphogluconate aldolase / 2-dehydro-3-deoxygluconate kinase n=2 Tax=Lactobacillus casei group RepID=K6RM45_LACCA
L2_047_000G1_scaffold_358_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18067..18891)
DNA (825bp) protein (275aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Lactobacillus casei group RepID=Q034I1_LACC3
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ABJ71391.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_358_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18926..19771)
DNA (846bp) protein (282aa)
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1256206 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp126.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=6 Tax=Lactobacillus casei group RepID=KDUI_LACC3
L2_047_000G1_scaffold_358_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20033..20800)
DNA (768bp) protein (256aa)
Transcriptional regulator, IclR family n=36 Tax=Lactobacillus casei group RepID=B3WB41_LACCB
Transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EPC14154.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L2_047_000G1_scaffold_358_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21016..21846
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q034I4_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ71388.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_358_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21843..23021
DNA (1179bp) protein (393aa)
Unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:EKQ16717.1}; EC=3.2.1.- {ECO:0000313|EMBL:EKQ16717.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Glucuronyl hydrolase n=2 Tax=Lactobacillus casei RepID=Q034I5_LACC3
glucuronyl hydrolase
L2_047_000G1_scaffold_358_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23121..23621
DNA (501bp) protein (167aa)
agaV; N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 (EC:2.7.1.69)
N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 n=33 Tax=Lactobacillus casei group RepID=K0MYC6_LACCA
PTS system N-acetylgalactosamine-specific transporter subunit IIB {ECO:0000313|EMBL:EPC90249.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_047_000G1_scaffold_358_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23774..24586
DNA (813bp) protein (271aa)
Phosphotransferase system sugar-specific EII component n=27 Tax=Lactobacillus casei group RepID=B3WB37_LACCB
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
PTS system N-acetylgalactosamine-specific transporter subunit IIC {ECO:0000313|EMBL:EPC90250.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_047_000G1_scaffold_358_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24576..25391
DNA (816bp) protein (272aa)
PTS system, hyaluronate-oligosaccharide-specific IID component {ECO:0000313|EMBL:EPC14159.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EPC14159.1};; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
N-acetylgalactosamine permease IID component n=38 Tax=Lactobacillus casei group RepID=K0NB11_LACCA
PTS system, N-acetylgalactosamine-specific IID component
L2_047_000G1_scaffold_358_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25511..25981
DNA (471bp) protein (157aa)
PTS system, hyaluronate-oligosaccharide-specific IIA component {ECO:0000313|EMBL:EPC14160.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EPC14160.1};; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
Phosphotransferase system, mannose/fructose-specific component IIA n=6 Tax=Lactobacillus casei group RepID=Q034I9_LACC3
PTS system mannose/fructose-specific transporter subunit IIA
L2_047_000G1_scaffold_358_26
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25981..26328
DNA (348bp) protein (116aa)
Protein translocase subunit yajC n=2 Tax=Lactobacillus casei group RepID=Q034J0_LACC3
preprotein translocase subunit YajC
Protein translocase subunit yajC {ECO:0000313|EMBL:ABJ71382.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_047_000G1_scaffold_358_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26267..28192
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q034J1_LACC3
Uncharacterized protein {ECO:0000313|EMBL:ABJ71381.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
hypothetical protein
L2_047_000G1_scaffold_358_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28262..29245
DNA (984bp) protein (328aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=Q034J2_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD07646.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L2_047_000G1_scaffold_358_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29270..31561
DNA (2292bp) protein (764aa)
Subtilisin-like serine protease n=2 Tax=Lactobacillus casei group RepID=Q034J3_LACC3
Subtilisin-like serine protease {ECO:0000313|EMBL:GAN37446.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
subtilisin-like serine protease
L2_047_000G1_scaffold_358_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31929..32087
DNA (159bp) protein (53aa)
Predicted holin-like toxin n=30 Tax=Lactobacillus casei group RepID=D8GDG8_LACCZ
putative holin-like toxin
Holin-like toxin {ECO:0000313|EMBL:EPC14165.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
Displaying items 1-30 of 61 in total

View Taxonomy