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L2_047_000G1_scaffold_393

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_393_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..520)
DNA (519bp) protein (173aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQU1_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ94450.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_047_000G1_scaffold_393_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(699..1598)
DNA (900bp) protein (300aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBX0_9FIRM
Signal transduction histidine kinase
L2_047_000G1_scaffold_393_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1591..2268)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77263.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000G1_scaffold_393_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2474..2827)
DNA (354bp) protein (118aa)
Spx/MgsR family transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW8_9FIRM
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:EES77262.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_393_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3030..4001
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77261.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_393_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4139..4531)
DNA (393bp) protein (131aa)
C_GCAxxG_C_C family protein n=2 Tax=Ruminococcus RepID=C6JBW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78348.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
C_GCAxxG_C_C family probable redox protein
L2_047_000G1_scaffold_393_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4847..5710
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77259.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L2_047_000G1_scaffold_393_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5857..6714
DNA (858bp) protein (286aa)
Phosphate ABC transporter, permease PstC n=2 Tax=Ruminococcus RepID=C6JBW4_9FIRM
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EES77258.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L2_047_000G1_scaffold_393_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6704..7609
DNA (906bp) protein (302aa)
Phosphate ABC transporter, permease PstA n=2 Tax=Ruminococcus RepID=C6JBW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78351.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L2_047_000G1_scaffold_393_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7615..8373
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW2_9FIRM
L2_047_000G1_scaffold_393_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8376..9047
DNA (672bp) protein (224aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Ruminococcus RepID=C6JBW1_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphate uptake regulator, PhoU
L2_047_000G1_scaffold_393_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9208..10875
DNA (1668bp) protein (556aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW0_9FIRM
L2_047_000G1_scaffold_393_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10944..12527)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77253.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
two component AraC family transcriptional regulator
L2_047_000G1_scaffold_393_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12564..14297)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77252.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
integral membrane sensor signal transduction histidine kinase
L2_047_000G1_scaffold_393_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14553..16031
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77251.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type sugar transport system, periplasmic component
L2_047_000G1_scaffold_393_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16094..16999
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77250.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type polysaccharide transport system, permease component
L2_047_000G1_scaffold_393_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17010..17900
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77249.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_393_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18063..20828
DNA (2766bp) protein (922aa)
beta-glucosidase (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77248.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_393_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21026..21583
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77247.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L2_047_000G1_scaffold_393_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21839..22420
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78740.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_393_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22492..23841
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78743.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted Fe-S oxidoreductases
L2_047_000G1_scaffold_393_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24351..25997
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78744.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_047_000G1_scaffold_393_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26001..27452
DNA (1452bp) protein (484aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. (EC:2.7.13.3)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL79_9FIRM
Periplasmic sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDD78746.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_047_000G1_scaffold_393_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27856..28914
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU8_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDD78748.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_047_000G1_scaffold_393_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29104..30624
DNA (1521bp) protein (507aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77241.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_047_000G1_scaffold_393_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30624..31679
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU6_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CDD78752.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_047_000G1_scaffold_393_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31679..32701
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77239.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_047_000G1_scaffold_393_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33380..34237
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77238.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted SAM-dependent methyltransferases
L2_047_000G1_scaffold_393_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34374..35237
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77226.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_393_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35355..35540
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CGY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77225.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy