ggKbase home page

L2_047_000G1_scaffold_400

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_400_1
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..647
DNA (645bp) protein (215aa)
putrescine transporter n=1 Tax=Serratia marcescens RepID=UPI000360E5F1
potE; putrescine transporter
Putrescine transporter {ECO:0000313|EMBL:KGY44664.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_400_2
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

734..1039
DNA (306bp) protein (102aa)
Putative nuclease n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6I1_SERMA
UPF0213 protein AF54_02247 {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
putative nuclease
L2_047_000G1_scaffold_400_3
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1026..1529)
DNA (504bp) protein (168aa)
N-acetyltransferase n=1 Tax=Serratia marcescens EGD-HP20 RepID=U1USA5_SERMA
Acyltransferase {ECO:0000313|EMBL:EZQ62399.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
putative acyltransferase
L2_047_000G1_scaffold_400_4
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..2044)
DNA (522bp) protein (174aa)
Putative sterol carrier protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A5Z9_SERMA
sterol-binding domain-containing protein
Lipid carrier protein {ECO:0000313|EMBL:EZQ62400.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_400_5
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2303..3298
DNA (996bp) protein (332aa)
Protease n=2 Tax=Serratia marcescens RepID=U1VYR9_SERMA
peptidase U32
Protease {ECO:0000313|EMBL:EZQ62401.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_400_6
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3310..4188
DNA (879bp) protein (293aa)
protease n=1 Tax=Serratia marcescens RepID=UPI0002F06935
Peptidase {ECO:0000313|EMBL:EZQ62402.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
putative protease
L2_047_000G1_scaffold_400_7
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4317..4859)
DNA (543bp) protein (181aa)
Chorismate mutase {ECO:0000256|PIRNR:PIRNR026640}; EC=5.4.99.5 {ECO:0000256|PIRNR:PIRNR026640};; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Putative chorismate mutase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6H8_SERMA
Monofunctional chorismate mutase (CM-F)
L2_047_000G1_scaffold_400_8
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4873..5661)
DNA (789bp) protein (263aa)
Putative esterase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6M1_SERMA
Uncharacterized protein {ECO:0000313|EMBL:EZQ62404.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
hypothetical protein
L2_047_000G1_scaffold_400_9
unknown

Not on your lists

6100..6312
DNA (213bp) protein (71aa)

This feature has no annotations

L2_047_000G1_scaffold_400_10
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6231..7370)
DNA (1140bp) protein (380aa)
ABC transporter permease n=1 Tax=Serratia marcescens RepID=UPI0002F7AD1B
ABC transporter
Uncharacterized protein {ECO:0000313|EMBL:EZQ62405.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_400_11
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7367..8521)
DNA (1155bp) protein (385aa)
antibiotic ABC transporter permease n=1 Tax=Serratia marcescens RepID=UPI00036F8F5D
Uncharacterized protein {ECO:0000313|EMBL:EZQ62406.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
permease protein of ABC transport system
L2_047_000G1_scaffold_400_12
Oryza sativa, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(8503..9474)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Oryza sativa subsp. indica RepID=B8BL62_ORYSI
secretion protein HlyD family protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEC68397.1}; TaxID=39946 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza sativa subsp. indica (Rice).;"
L2_047_000G1_scaffold_400_13
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9707..10720
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Serratia marcescens RepID=UPI000362E361
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF87123.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_400_14
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10758..10997)
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Serratia marcescens RepID=L7ZI96_SERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ62409.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_400_15
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10994..12208)
DNA (1215bp) protein (405aa)
membrane protein n=1 Tax=Serratia marcescens RepID=UPI000315C458
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:BAO36695.1}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
L2_047_000G1_scaffold_400_16
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12354..14276)
DNA (1923bp) protein (641aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
ATP-dependent RNA helicase DeaD n=3 Tax=Serratia marcescens RepID=L7ZGD2_SERMA
deaD; ATP-dependent RNA helicase
L2_047_000G1_scaffold_400_17
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14463..15347)
DNA (885bp) protein (295aa)
Lipoprotein NlpI n=3 Tax=Serratia marcescens RepID=L7ZA50_SERMA
nlpI; lipoprotein involved in osmotic sensitivity and filamentation
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_400_18
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15476..17593)
DNA (2118bp) protein (706aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
polynucleotide phosphorylase/polyadenylase n=1 Tax=Serratia marcescens RepID=UPI00031A6A7D
polynucleotide phosphorylase/polyadenylase
L2_047_000G1_scaffold_400_19
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17850..18119)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=10 Tax=Serratia RepID=G0B4D1_SERSA
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_400_20
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18244..19188)
DNA (945bp) protein (315aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
tRNA pseudouridine synthase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A5Q1_SERMA
truB; tRNA pseudouridine synthase B
L2_047_000G1_scaffold_400_21
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19188..19598)
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=4 Tax=Serratia marcescens RepID=L7ZGC7_SERMA
rbfA; 30s ribosome binding factor
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_400_22
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19669..22359)
DNA (2691bp) protein (897aa)
Translation initiation factor IF-2 n=4 Tax=Serratia marcescens RepID=L7ZA45_SERMA
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
infB; translation initiation factor IF-2
L2_047_000G1_scaffold_400_23
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22383..23891)
DNA (1509bp) protein (503aa)
Transcription termination/antitermination L factor n=3 Tax=Serratia marcescens RepID=L7ZGA9_SERMA
nusA; transcription termination/antitermination L factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_400_24
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23913..24335)
DNA (423bp) protein (141aa)
Ribosome maturation factor RimP n=3 Tax=Serratia marcescens RepID=M3AKM8_SERMA
ribosome maturation protein RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_400_25
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24877..25212)
DNA (336bp) protein (112aa)
Protein translocase subunit secG n=1 Tax=Serratia marcescens FGI94 RepID=L0MDB1_SERMA
secG; preprotein translocase membrane subunit
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KFF87111.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_400_26
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25433..26770)
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
Phosphoglucosamine mutase n=1 Tax=Serratia marcescens EGD-HP20 RepID=U1USD1_SERMA
glmM; phosphoglucosamine mutase
L2_047_000G1_scaffold_400_27
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26775..27611)
DNA (837bp) protein (279aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Serratia marcescens VGH107 RepID=M3CPA9_SERMA
L2_047_000G1_scaffold_400_28
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27704..29644)
DNA (1941bp) protein (647aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=Serratia marcescens RepID=L7ZGA5_SERMA
ftsH; protease, ATP-dependent zinc-metallo
L2_047_000G1_scaffold_400_29
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29692..30321)
DNA (630bp) protein (210aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
Ribosomal RNA large subunit methyltransferase E n=4 Tax=Serratia marcescens RepID=L7ZI85_SERMA
rrmJ; 23S rRNA methyltransferase J
L2_047_000G1_scaffold_400_30
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30465..30758
DNA (294bp) protein (98aa)
Uncharacterized protein n=14 Tax=Serratia RepID=A8G8Z9_SERP5
yhbY; RNA-binding protein YhbY
Uncharacterized protein {ECO:0000313|EMBL:BAO36680.1}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
Displaying items 1-30 of 63 in total

View Taxonomy