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L2_047_000G1_scaffold_413

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_413_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..219)
DNA (219bp) protein (73aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:CBL14964.1}; EC=6.1.1.11 {ECO:0000313|EMBL:CBL14964.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Seryl-tRNA synthetase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5R9_9FIRM
L2_047_000G1_scaffold_413_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244..1092)
DNA (849bp) protein (283aa)
ParB-like protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6D7_9FIRM
ParB-like protein {ECO:0000313|EMBL:CCX84342.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
spo0J; Stage 0 sporulation protein J
L2_047_000G1_scaffold_413_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1094..1861)
DNA (768bp) protein (256aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E871_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CCX84341.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
soj; Sporulation initiation inhibitor protein soj
L2_047_000G1_scaffold_413_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2148..3005)
DNA (858bp) protein (286aa)
ParB-like protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVR3_9FIRM
ParB-like protein {ECO:0000313|EMBL:CCX84340.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
noc; Nucleoid occlusion protein
L2_047_000G1_scaffold_413_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3130..3843)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZI9_9FIRM
L2_047_000G1_scaffold_413_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3843..5717)
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=root RepID=R5DVY6_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
glucose-inhibited division protein A
L2_047_000G1_scaffold_413_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5726..7093)
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
tRNA modification GTPase MnmE n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5S2_9FIRM
tRNA modification GTPase TrmE
L2_047_000G1_scaffold_413_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7136..7945)
DNA (810bp) protein (270aa)
R3H domain protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E866_9FIRM
R3H domain protein {ECO:0000313|EMBL:CCX84336.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_047_000G1_scaffold_413_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7950..8957)
DNA (1008bp) protein (336aa)
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain n=2 Tax=root RepID=D4L5S3_9FIRM
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain {ECO:0000313|EMBL:CBL14968.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_10

Not on your lists

comp(9211..9552)
DNA (342bp) protein (114aa)
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Riibonuclease P {ECO:0000313|EMBL:EKC58703.1}; EC=3.1.26.5 {ECO:0000313|EMBL:EKC58703.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Ribonuclease P protein component n=2 Tax=root RepID=D4L5S5_9FIRM
L2_047_000G1_scaffold_413_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9619..9753)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Ruminococcus RepID=D4L5S6_9FIRM
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000G1_scaffold_413_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10122..11519
DNA (1398bp) protein (466aa)
Chromosomal replication initiator protein DnaA n=3 Tax=root RepID=D4L5S7_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
chromosomal replication initiator protein DnaA
L2_047_000G1_scaffold_413_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11749..12855
DNA (1107bp) protein (369aa)
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA polymerase III subunit beta n=2 Tax=Ruminococcus RepID=D4L5S8_9FIRM
L2_047_000G1_scaffold_413_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12845..13057
DNA (213bp) protein (71aa)
Uncharacterized conserved protein n=2 Tax=Ruminococcus RepID=D4L5S9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL14974.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13078..14175
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVX6_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DNA replication and repair protein RecF
L2_047_000G1_scaffold_413_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14175..14447
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E6B9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX84327.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000G1_scaffold_413_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14474..15205
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5T1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14976.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15618..17693
DNA (2076bp) protein (692aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVQ0_9FIRM
L2_047_000G1_scaffold_413_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17735..18166
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZH4_9FIRM
conserved hypothetical protein TIGR00051
Uncharacterized protein {ECO:0000313|EMBL:CCX84324.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000G1_scaffold_413_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18392..20962
DNA (2571bp) protein (857aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=root RepID=R5DVX0_9FIRM
L2_047_000G1_scaffold_413_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21032..21787
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5T4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14979.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22073..23962)
DNA (1890bp) protein (630aa)
Glycosidases (EC:3.2.1.41)
Glycosidases {ECO:0000313|EMBL:CBL14980.1}; EC=3.2.1.41 {ECO:0000313|EMBL:CBL14980.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glycosidases n=2 Tax=root RepID=D4L5T5_9FIRM
L2_047_000G1_scaffold_413_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24252..24896
DNA (645bp) protein (215aa)
Cell division protein ZapA n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E823_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Cell division protein ZapA.
L2_047_000G1_scaffold_413_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24893..26956
DNA (2064bp) protein (688aa)
Collagenase and related proteases (EC:3.4.-.-)
Collagenase and related proteases {ECO:0000313|EMBL:CBL14982.1}; EC=3.4.-.- {ECO:0000313|EMBL:CBL14982.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Collagenase and related proteases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5T7_9FIRM
L2_047_000G1_scaffold_413_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27126..27566
DNA (441bp) protein (147aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Ruminococcus RepID=D4L5T8_9FIRM
L2_047_000G1_scaffold_413_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27677..28687
DNA (1011bp) protein (337aa)
Rod shape-determining protein MreB n=3 Tax=root RepID=D4L5T9_9FIRM
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:CBL14984.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28762..29583
DNA (822bp) protein (274aa)
Cell shape-determining protein MreC n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5U0_9FIRM
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29580..30083
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5U1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14986.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000G1_scaffold_413_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30107..32128
DNA (2022bp) protein (674aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVL2_9FIRM
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CCX84280.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_047_000G1_scaffold_413_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32400..33140
DNA (741bp) protein (247aa)
Septum formation inhibitor-activating ATPase n=2 Tax=Ruminococcus RepID=D4L5U3_9FIRM
Septum formation inhibitor-activating ATPase
Septum formation inhibitor-activating ATPase {ECO:0000313|EMBL:CBL14988.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 57 in total

View Taxonomy