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L2_047_000G1_scaffold_495

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_495_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(124..792)
DNA (669bp) protein (223aa)
ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 2 (EC:3.6.3.-)
Aliphatic sulfonates import ATP-binding protein SsuB 2 {ECO:0000313|EMBL:AGX42286.1}; EC=3.6.3.- {ECO:0000313|EMBL:AGX42286.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Aliphatic sulfonates import ATP-binding protein SsuB 2 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRI5_CLOSA
L2_047_000G1_scaffold_495_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(792..1547)
DNA (756bp) protein (252aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ74_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AGF54901.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_495_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1522..2538)
DNA (1017bp) protein (339aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN98_CLOSA
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:AGX42284.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_495_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2692..3111)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MAC7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54899.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_495_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3368..5983
DNA (2616bp) protein (872aa)
ATPase n=1 Tax=Clostridium beijerinckii RepID=UPI00031C95A2
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ABR33220.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
ATPase P
L2_047_000G1_scaffold_495_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6348..6650
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LS89_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33219.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_047_000G1_scaffold_495_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6713..8557)
DNA (1845bp) protein (615aa)
Asparagine synthetase {ECO:0000313|EMBL:AGX42282.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AGX42282.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
asnO; asparagine synthetase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS58_CLOSA
L2_047_000G1_scaffold_495_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8983..10398
DNA (1416bp) protein (472aa)
GerA spore germination protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZU7_9CLOT
GerA spore germination protein {ECO:0000313|EMBL:EHI98266.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
GerA spore germination protein
L2_047_000G1_scaffold_495_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10502..10846)
DNA (345bp) protein (115aa)
UPI0003A1FE67 related cluster n=1 Tax=unknown RepID=UPI0003A1FE67
Uncharacterized protein {ECO:0000313|EMBL:KHD13393.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_047_000G1_scaffold_495_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10865..11701)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U1E9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ53837.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RNA-binding S1 domain-containing protein
L2_047_000G1_scaffold_495_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11741..12241)
DNA (501bp) protein (167aa)
Carbonic anhydrase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZU5_9CLOT
Carbonic anhydrase {ECO:0000313|EMBL:EHI98264.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
carbonic anhydrase
L2_047_000G1_scaffold_495_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12360..13367
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LS84_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33214.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_047_000G1_scaffold_495_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13394..13717)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LS83_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33213.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_047_000G1_scaffold_495_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13963..14430
DNA (468bp) protein (156aa)
Regulatory protein AsnC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS53_CLOSA
asnC; regulatory protein AsnC
Regulatory protein AsnC {ECO:0000313|EMBL:AGX42277.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_495_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14595..14792
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRH6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42276.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_495_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14928..16682)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T3A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ53843.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_047_000G1_scaffold_495_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17076..17954
DNA (879bp) protein (293aa)
competence protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002FE1D0D
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AJG97695.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
beta-lactamase domain-containing protein
L2_047_000G1_scaffold_495_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18120..19577
DNA (1458bp) protein (486aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
gltX; glutamate--tRNA ligase GltX (EC:6.1.1.17)
Glutamate--tRNA ligase n=3 Tax=Clostridium butyricum RepID=C4IHU6_CLOBU
L2_047_000G1_scaffold_495_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19677..20450)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNV2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42270.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_495_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20465..21193)
DNA (729bp) protein (243aa)
HAD-superfamily subfamily IB hydrolase n=4 Tax=Clostridium butyricum RepID=B1QTQ0_CLOBU
HAD hydrolase, family IB {ECO:0000313|EMBL:ENZ35853.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD family hydrolase
L2_047_000G1_scaffold_495_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21362..21898)
DNA (537bp) protein (179aa)
Nitroreductase n=2 Tax=Clostridium RepID=A6LS75_CLOB8
nitroreductase
NAD(P)H nitroreductase {ECO:0000313|EMBL:ETD71629.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_047_000G1_scaffold_495_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22042..23190)
DNA (1149bp) protein (383aa)
Permease n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS43_CLOSA
permease
Permease {ECO:0000313|EMBL:AGX42267.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_495_23
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23716..25407)
DNA (1692bp) protein (564aa)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Arginyl-tRNA synthetase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G6C2_CLOPA
argS; arginyl-tRNA synthetase
L2_047_000G1_scaffold_495_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25839..26507)
DNA (669bp) protein (223aa)
peptidase, M50 family (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZT3_9CLOT
Zn-dependent protease {ECO:0000313|EMBL:EKQ53850.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_047_000G1_scaffold_495_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26599..27636)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KC50_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94749.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_047_000G1_scaffold_495_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27656..28693)
DNA (1038bp) protein (346aa)
Exopolysaccharide biosynthesis protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP11_CLOSA
exopolysaccharide biosynthesis protein
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AGX42263.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_495_27
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28834..29811
DNA (978bp) protein (326aa)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZT0_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
biotin--acetyl-CoA-carboxylase ligase
L2_047_000G1_scaffold_495_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29879..30892)
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
UPI0003A61A79 related cluster n=1 Tax=unknown RepID=UPI0003A61A79
L2_047_000G1_scaffold_495_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31119..32075)
DNA (957bp) protein (319aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ldh1; L-lactate dehydrogenase Ldh (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASV8_CLOBU
L2_047_000G1_scaffold_495_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32322..32942
DNA (621bp) protein (207aa)
DNA polymerase III subunit epsilon n=1 Tax=Clostridium beijerinckii RepID=UPI0002E85F40
Exonuclease, RNase T and DNA polymerase III {ECO:0000313|EMBL:AJG97684.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
exonuclease, RNase T and DNA polymerase III
Displaying items 1-30 of 50 in total

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