ggKbase home page

L2_047_000G1_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_542_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..205
DNA (204bp) protein (68aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
Methionine-R-sulfoxide reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK99_9FIRM
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EHO25567.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_047_000G1_scaffold_542_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(285..503)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BYF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76853.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_047_000G1_scaffold_542_3
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(926..1813)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8IXU6_9BACI
LysR family transcriptional regulator {ECO:0000313|EMBL:CEG32312.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
LysR family transcriptional regulator
L2_047_000G1_scaffold_542_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2046..2807
DNA (762bp) protein (254aa)
Uncharacterized ACR protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V2P6_CLOSS
cyclase
Cyclase {ECO:0000313|EMBL:AII40360.1}; TaxID=1344042 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium T110.;"
L2_047_000G1_scaffold_542_5
Enterococcus casseliflavus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2859..4070
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A6C0_ENTCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEV38031.1}; TaxID=565655 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus casseliflavus EC20.;"
L2_047_000G1_scaffold_542_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4135..5385
DNA (1251bp) protein (417aa)
Transporter, major facilitator family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJK0_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK50730.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
UhpC; sugar phosphate permease
L2_047_000G1_scaffold_542_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5458..6372)
DNA (915bp) protein (305aa)
fumarylacetoacetase n=1 Tax=Laceyella sacchari RepID=UPI0003B3D5BD
Uncharacterized protein {ECO:0000313|EMBL:ETX07429.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
fumarylacetoacetate (FAA) hydrolase family protein
L2_047_000G1_scaffold_542_8
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

6844..7476
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15177.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
diguanylate cyclase (GGDEF) domain
L2_047_000G1_scaffold_542_9
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7968..8402
DNA (435bp) protein (145aa)
Hpt domain protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JUI1_9FIRM
Hpt domain protein {ECO:0000313|EMBL:CDE67233.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L2_047_000G1_scaffold_542_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8851..11481
DNA (2631bp) protein (877aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CWW4_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI71751.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_047_000G1_scaffold_542_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11478..11669
DNA (192bp) protein (64aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
PAS domain S-box protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYL7_9CLOT
hypothetical protein
L2_047_000G1_scaffold_542_12
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11881..12390
DNA (510bp) protein (170aa)
PAS domain S-box protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EED5_9CLOT
PAS domain S-box protein {ECO:0000313|EMBL:EEG30183.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L2_047_000G1_scaffold_542_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12372..12965
DNA (594bp) protein (198aa)
nitroreductase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B51777
Nitroreductase family protein {ECO:0000313|EMBL:EDS75441.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
nitroreductase
L2_047_000G1_scaffold_542_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13207..14496
DNA (1290bp) protein (430aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
GMP synthase (Glutamine-hydrolyzing) domain-containing protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAJ5_9FIRM
GMP synthase
L2_047_000G1_scaffold_542_15
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14685..15443)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKW2_TREBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE16559.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L2_047_000G1_scaffold_542_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

15619..15966
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14177.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
XRE family transcriptional regulator
L2_047_000G1_scaffold_542_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16180..17370
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C799_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55690.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
aspartate/tyrosine/aromatic aminotransferase
L2_047_000G1_scaffold_542_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17455..18894
DNA (1440bp) protein (480aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Adenylosuccinate lyase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUV8_9FIRM
adenylosuccinate lyase
L2_047_000G1_scaffold_542_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18915..19901
DNA (987bp) protein (329aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=3 Tax=Clostridiales RepID=G9YMQ4_9FIRM
L2_047_000G1_scaffold_542_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19951..21195)
DNA (1245bp) protein (415aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pfk; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBV7_9FIRM
L2_047_000G1_scaffold_542_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21367..22302
DNA (936bp) protein (312aa)
fba; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQK2_9FIRM
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CDB26710.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_047_000G1_scaffold_542_22
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

22708..23334
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13727.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_047_000G1_scaffold_542_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

23331..23534
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13726.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
XRE family transcriptional regulator
L2_047_000G1_scaffold_542_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(23576..23752)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45690.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L2_047_000G1_scaffold_542_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23770..25080)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33834.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L2_047_000G1_scaffold_542_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25067..26029)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33835.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative viral replication protein.
L2_047_000G1_scaffold_542_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26185..26505)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53722.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_047_000G1_scaffold_542_28
unknown

Not on your lists

27257..27454
DNA (198bp) protein (66aa)

This feature has no annotations

L2_047_000G1_scaffold_542_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(27535..27993)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15152.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_047_000G1_scaffold_542_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28470..28841
DNA (372bp) protein (124aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CRH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53721.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
helix-turn-helix domain-containing protein
Displaying items 1-30 of 76 in total

View Taxonomy