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L2_047_000G1_scaffold_561

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_561_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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166..744
DNA (579bp) protein (193aa)
ydeA; protease YdeA (EC:3.2.-.-)
Putative intracellular protease/amidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBL5_9CLOT
Putative intracellular protease/amidase {ECO:0000313|EMBL:EKQ57269.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_047_000G1_scaffold_561_2
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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885..1433
DNA (549bp) protein (183aa)
Nitroreductase n=1 Tax=Clostridium sp. CAG:590 RepID=R5EAP7_9CLOT
Nitroreductase {ECO:0000313|EMBL:CCX89498.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
nitroreductase
L2_047_000G1_scaffold_561_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1858..4794
DNA (2937bp) protein (979aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59602.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_047_000G1_scaffold_561_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4804..6165
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99057.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_561_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6203..6997
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) RepID=A7GE94_CLOBL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS40935.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L2_047_000G1_scaffold_561_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7056..8234)
DNA (1179bp) protein (393aa)
Tyrosine recombinase XerC-like protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LW74_9CLOT
tyrosine recombinase XerC-like protein
Tyrosine recombinase XerC-like protein {ECO:0000313|EMBL:AGF57440.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_561_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8284..8682)
DNA (399bp) protein (133aa)
Putative transcriptional regulator with C-terminal CBS domain n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LRK3_9CLOT
DNA-binding protein {ECO:0000313|EMBL:KHD17175.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative transcriptional regulator with C-terminal CBS domain
L2_047_000G1_scaffold_561_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8910..9119
DNA (210bp) protein (70aa)
Putative transcriptional regulator n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MMI9_9CLOT
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGF57438.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_561_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9106..9354
DNA (249bp) protein (83aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N1S2_9CLOT
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:AGF57437.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_561_10

Not on your lists

9396..9518
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21936.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000G1_scaffold_561_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9511..10800
DNA (1290bp) protein (430aa)
DnaD-like protein,putative phage replisome organizer n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T8R8_9CLOT
DnaD-like protein,putative phage replisome organizer {ECO:0000313|EMBL:EKQ56208.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
phage replisome organizer
L2_047_000G1_scaffold_561_12

Not on your lists

10850..11476
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z375_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21934.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_000G1_scaffold_561_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11526..11768
DNA (243bp) protein (81aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium beijerinckii RepID=UPI0002E42770
transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EHI98739.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L2_047_000G1_scaffold_561_14
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11944..13959
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis MC28 RepID=K0G3C6_BACTU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU18129.1}; TaxID=1195464 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis MC28.;"
L2_047_000G1_scaffold_561_15
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13946..14920
DNA (975bp) protein (325aa)
HNH nuclease n=1 Tax=Bacillus thuringiensis MC28 RepID=K0G973_BACTU
HNH nuclease
HNH nuclease {ECO:0000313|EMBL:AFU18130.1}; TaxID=1195464 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis MC28.;"
L2_047_000G1_scaffold_561_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15163..16506
DNA (1344bp) protein (448aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG60_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35363.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_047_000G1_scaffold_561_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16522..16782
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0F6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99017.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_561_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16920..17138)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M226_9CLOT
hypothetical protein DUF2922
Uncharacterized protein {ECO:0000313|EMBL:AGF59665.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_561_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17181..17405)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXX2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44471.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_561_20
unknown

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17558..17737
DNA (180bp) protein (60aa)

This feature has no annotations

L2_047_000G1_scaffold_561_21
unknown

Not on your lists

17759..17872
DNA (114bp) protein (38aa)

This feature has no annotations

L2_047_000G1_scaffold_561_22
unknown

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18096..18512
DNA (417bp) protein (139aa)

This feature has no annotations

L2_047_000G1_scaffold_561_23
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18534..18896
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SFA3_CALK2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ46428.1}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 /; 2002).;"
L2_047_000G1_scaffold_561_24
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20411..20818
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1N2N8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57712.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_561_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21430..22191
DNA (762bp) protein (254aa)
Metal-dependent phosphohydrolase HD sub domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5C3_9CLOT
Metal-dependent phosphohydrolase HD sub domain containing protein {ECO:0000313|EMBL:EHI99878.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
putative domain HDIG-containing protein
L2_047_000G1_scaffold_561_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22572..22748)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=UPI000344D5CA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41461.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_561_27
unknown

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22898..23212
DNA (315bp) protein (105aa)

This feature has no annotations

L2_047_000G1_scaffold_561_28

Not on your lists

23320..23676
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z5C6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ17565.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000G1_scaffold_561_29
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24944..25348
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EZB5_CLOTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI50093.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L2_047_000G1_scaffold_561_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25336..25551
DNA (216bp) protein (72aa)
Conserved domain protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A3P7_CLOBO
hypothetical protein
Putative helix-turn-helix domain-containing protein {ECO:0000313|EMBL:BAP25842.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Displaying items 1-30 of 58 in total

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