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L2_047_000G1_scaffold_564

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_564_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(152..2428)
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45967.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
zink-carboxypeptidase
L2_047_000G1_scaffold_564_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2740..3753)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46713.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative oxidoreductase
L2_047_000G1_scaffold_564_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3786..4751)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46714.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_047_000G1_scaffold_564_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4845..5423)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46715.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_564_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5570..6877)
DNA (1308bp) protein (436aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Phosphomethylpyrimidine synthase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BCW9_9CLOT
hydroxymethylpyrimidine synthase
L2_047_000G1_scaffold_564_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6911..7699)
DNA (789bp) protein (263aa)
thiDE1; thiamine biosynthesis bifunctional protein ThiED (EC:2.7.4.7 2.5.1.3 2.7.1.49)
Phosphomethylpyrimidine kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9Q8_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGJ47086.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_564_7
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(7696..8319)
DNA (624bp) protein (208aa)
Thiamine-phosphate pyrophosphorylase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZJY3_9FIRM
Thiamine-phosphate pyrophosphorylase {ECO:0000313|EMBL:CDD30762.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_047_000G1_scaffold_564_8
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(8312..9565)
DNA (1254bp) protein (418aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ANN9_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CCX40851.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L2_047_000G1_scaffold_564_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9580..10347)
DNA (768bp) protein (256aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Thiazole synthase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AC76_9FIRM
hypothetical protein
L2_047_000G1_scaffold_564_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10390..11049)
DNA (660bp) protein (220aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Dorea sp. 5-2 RepID=R9MWS8_9FIRM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EOS75238.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
thiamine biosynthesis protein ThiF
L2_047_000G1_scaffold_564_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11033..11227)
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLH0_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EHO23264.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
thiS_1; thiamine biosynthesis protein ThiS
L2_047_000G1_scaffold_564_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11853..12698)
DNA (846bp) protein (282aa)
folD; Bifunctional protein FolD, Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH3_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_564_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12701..13654)
DNA (954bp) protein (318aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lgt; prolipoprotein diacylglycerol transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH2_9FIRM
L2_047_000G1_scaffold_564_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13651..14934)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47349.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
M16B family peptidase
L2_047_000G1_scaffold_564_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14939..16222)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47348.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M16B family protein
L2_047_000G1_scaffold_564_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16563..16943
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47360.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_000G1_scaffold_564_17
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16802..17146)
DNA (345bp) protein (115aa)
Putative transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFN0_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EMS69402.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
putative transcriptional regulator
L2_047_000G1_scaffold_564_18
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17143..17496)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JY88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36222.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_047_000G1_scaffold_564_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17669..18589
DNA (921bp) protein (307aa)
Stage III sporulation protein AA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH4_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:EGJ47352.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAA; stage III sporulation protein AA
L2_047_000G1_scaffold_564_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18586..19095
DNA (510bp) protein (170aa)
Stage III sporulation protein AB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH5_9FIRM
Stage III sporulation protein AB {ECO:0000313|EMBL:EGJ47353.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_564_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19127..19321
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH6_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:EGJ47354.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAC; stage III sporulation protein AC
L2_047_000G1_scaffold_564_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19321..19719
DNA (399bp) protein (133aa)
Stage III sporulation protein AD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH7_9FIRM
Stage III sporulation protein AD {ECO:0000313|EMBL:EGJ47355.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAD; putative stage III sporulation protein AD
L2_047_000G1_scaffold_564_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19716..20786
DNA (1071bp) protein (357aa)
Stage III sporulation protein AE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH8_9FIRM
Stage III sporulation protein AE {ECO:0000313|EMBL:EGJ47356.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAE; putative stage III sporulation protein AE
L2_047_000G1_scaffold_564_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20783..21280
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47357.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAF; putative stage III sporulation protein AF
L2_047_000G1_scaffold_564_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21277..21789
DNA (513bp) protein (171aa)
Stage III sporulation protein AG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAI0_9FIRM
Stage III sporulation protein AG {ECO:0000313|EMBL:EGJ47358.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAG; putative stage III sporulation protein AG
L2_047_000G1_scaffold_564_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21882..22490
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47359.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIIAH; putative stage III sporulation protein AH
L2_047_000G1_scaffold_564_27
unknown

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comp(22719..23012)
DNA (294bp) protein (98aa)

This feature has no annotations

L2_047_000G1_scaffold_564_28
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23395..24597)
DNA (1203bp) protein (401aa)
sodium:glutamate symporter n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037D21E8
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EJF38463.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative sodium/glutamate symporter
L2_047_000G1_scaffold_564_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25243..26457
DNA (1215bp) protein (405aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAX5_9FIRM
L2_047_000G1_scaffold_564_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26836..28218
DNA (1383bp) protein (461aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAX6_9FIRM
Displaying items 1-30 of 65 in total

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