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L2_047_000G1_scaffold_700

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_700_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

3..449
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E4DCA5
Uncharacterized protein {ECO:0000313|EMBL:CCZ32930.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
man2A; beta-mannosidase Man2A
L2_047_000G1_scaffold_700_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(680..1057)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77502.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1292).
L2_047_000G1_scaffold_700_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1276..2031
DNA (756bp) protein (252aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77504.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_047_000G1_scaffold_700_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2095..3990
DNA (1896bp) protein (632aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77506.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_047_000G1_scaffold_700_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3968..4522
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77508.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_700_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5038..6573
DNA (1536bp) protein (512aa)
Sodium/proline symporter n=2 Tax=Ruminococcus RepID=C6JGG2_9FIRM
Sodium:proline symporter {ECO:0000313|EMBL:CDD77510.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putP; sodium/proline symporter
L2_047_000G1_scaffold_700_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6677..7792
DNA (1116bp) protein (372aa)
glf; UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=2 Tax=Ruminococcus RepID=C6JGG1_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDD77512.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_047_000G1_scaffold_700_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7864..8448
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77513.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_700_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8481..11405
DNA (2925bp) protein (975aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77514.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_047_000G1_scaffold_700_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11422..12330
DNA (909bp) protein (303aa)
GTPase Era n=2 Tax=Ruminococcus RepID=C6JGF8_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
GTP-binding protein Era
L2_047_000G1_scaffold_700_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12359..13111
DNA (753bp) protein (251aa)
DNA repair protein RecO n=2 Tax=Ruminococcus RepID=C6JGF7_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA replication and repair protein RecO
L2_047_000G1_scaffold_700_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13264..14658
DNA (1395bp) protein (465aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHR6_9FIRM
L2_047_000G1_scaffold_700_13
unknown

Not on your lists

14688..14870
DNA (183bp) protein (61aa)

This feature has no annotations

L2_047_000G1_scaffold_700_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14887..16089
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76316.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Mn2+ and Fe2+ transporters of the NRAMP family
L2_047_000G1_scaffold_700_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16243..16968
DNA (726bp) protein (242aa)
TIGR00370 family protein n=2 Tax=Ruminococcus RepID=C6JGF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76317.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00370
L2_047_000G1_scaffold_700_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16970..17977
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75833.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
biotin-dependent carboxylase uncharacterized domain
L2_047_000G1_scaffold_700_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18020..18457
DNA (438bp) protein (146aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGF2_9FIRM
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EES75832.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L2_047_000G1_scaffold_700_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18476..19825
DNA (1350bp) protein (450aa)
biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Ruminococcus RepID=C6JGF1_9FIRM
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EES75831.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_700_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19912..20682
DNA (771bp) protein (257aa)
UPF0271 protein RSAG_03017 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGF0_9FIRM
UPF0271 protein RSAG_03017 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized proteins, homologs of lactam utilization protein B
L2_047_000G1_scaffold_700_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20789..21415)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75829.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cytidylate kinase
L2_047_000G1_scaffold_700_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21567..22568
DNA (1002bp) protein (334aa)
TAXI family TRAP transporter solute receptor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE7_9FIRM
TAXI family TRAP transporter solute receptor {ECO:0000313|EMBL:EES75827.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transporter
L2_047_000G1_scaffold_700_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22574..24541
DNA (1968bp) protein (656aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE6_9FIRM
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EES75826.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transporter
L2_047_000G1_scaffold_700_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24602..25543)
DNA (942bp) protein (314aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE5_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EES75825.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_700_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25547..26575)
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE4_9FIRM
L2_047_000G1_scaffold_700_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26752..27648)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDR4_9FIRM
L2_047_000G1_scaffold_700_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27867..29048)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75822.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_047_000G1_scaffold_700_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29467..30222
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76236.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_700_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30370..31392
DNA (1023bp) protein (341aa)
Transmembrane protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG29_9FIRM
Transmembrane protein {ECO:0000313|EMBL:CDD76238.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted acyltransferases
L2_047_000G1_scaffold_700_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31624..32364
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75818.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_000G1_scaffold_700_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32368..33852
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76242.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative efflux protein, MATE family
Displaying items 1-30 of 80 in total

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