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L2_047_000G1_scaffold_731

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_731_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(221..1222)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F7A2E9
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CCY31646.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_047_000G1_scaffold_731_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1453..5538)
DNA (4086bp) protein (1362aa)
tail protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FAEF67
Uncharacterized protein {ECO:0000313|EMBL:EES76331.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ig-like domain-containing surface protein
L2_047_000G1_scaffold_731_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5921..6817
DNA (897bp) protein (299aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BNH1_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI73765.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
diguanylate cyclase
L2_047_000G1_scaffold_731_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6921..9437
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76563.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent transcriptional regulator-like protein
L2_047_000G1_scaffold_731_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9517..9789)
DNA (273bp) protein (91aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76335.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_731_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9803..11287)
DNA (1485bp) protein (495aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY9_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EES76336.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_731_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11319..12998)
DNA (1680bp) protein (560aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF33_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD76560.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_731_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13018..13911)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEB5_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD76559.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_731_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13924..14862)
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEZ2_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD76558.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_047_000G1_scaffold_731_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15081..16106
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76557.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, LacI family
L2_047_000G1_scaffold_731_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16563..16670)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76341.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_731_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16983..17177)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76555.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_047_000G1_scaffold_731_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17365..18789)
DNA (1425bp) protein (475aa)
alpha-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76342.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_731_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18808..19635)
DNA (828bp) protein (276aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGU8_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD76553.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter
L2_047_000G1_scaffold_731_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19647..20528)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFN8_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD76552.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter permease
L2_047_000G1_scaffold_731_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20687..22033)
DNA (1347bp) protein (449aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEN1_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD76551.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter substrate-binding protein
L2_047_000G1_scaffold_731_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22346..24130
DNA (1785bp) protein (595aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEZ9_9FIRM
Histidine kinase {ECO:0000313|EMBL:CDD76550.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_731_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24167..25345
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF00_9FIRM
Two component transcriptional regulator {ECO:0000313|EMBL:CDD76549.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_000G1_scaffold_731_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25424..27679)
DNA (2256bp) protein (752aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76548.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
alpha-L-fucosidase
L2_047_000G1_scaffold_731_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27767..28150)
DNA (384bp) protein (128aa)
EAL domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL3_9FIRM
EAL domain-containing protein {ECO:0000313|EMBL:CDD80250.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
FOG: EAL domain
L2_047_000G1_scaffold_731_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28601..29170)
DNA (570bp) protein (190aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNB3_9FIRM
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CDD78898.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
NapH; polyferredoxin
L2_047_000G1_scaffold_731_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29388..29972
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76352.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cytidylate kinase
L2_047_000G1_scaffold_731_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30133..30609)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76353.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acetyltransferases
L2_047_000G1_scaffold_731_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30652..31782)
DNA (1131bp) protein (377aa)
HipA domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ8_9FIRM
HipA domain-containing protein {ECO:0000313|EMBL:CDD78891.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HipA N-terminal domain
L2_047_000G1_scaffold_731_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31769..32047)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF08_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD78890.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator
L2_047_000G1_scaffold_731_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32289..32867
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76356.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L2_047_000G1_scaffold_731_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32877..34421)
DNA (1545bp) protein (515aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76357.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_000G1_scaffold_731_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34525..34755)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78884.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acyl carrier protein
L2_047_000G1_scaffold_731_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34782..36170)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78883.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Condensation domain.
L2_047_000G1_scaffold_731_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36470..37456)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76360.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Prolyl oligopeptidase family.
Displaying items 1-30 of 96 in total

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