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L2_047_000G1_scaffold_3008

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_3008_1
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..512
DNA (510bp) protein (170aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CLK3_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA73699.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
lipid A export ATP-binding/permease protein msbA
L2_047_000G1_scaffold_3008_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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514..2250
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98067.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_000G1_scaffold_3008_3
unknown

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comp(2393..2884)
DNA (492bp) protein (164aa)

This feature has no annotations

L2_047_000G1_scaffold_3008_4
Exiguobacterium sibiricum, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3419..3928)
DNA (510bp) protein (170aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) RepID=B1YHM9_EXIS2
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACB61202.1}; TaxID=262543 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15).;"
L2_047_000G1_scaffold_3008_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4079..4276)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJZ3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55141.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_3008_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4312..4842
DNA (531bp) protein (177aa)
Putative Mn-containing catalase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYC2_9CLOT
Putative Mn-containing catalase {ECO:0000313|EMBL:CDG01301.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_047_000G1_scaffold_3008_7
unknown

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comp(4868..5308)
DNA (441bp) protein (147aa)

This feature has no annotations

L2_047_000G1_scaffold_3008_8
unknown

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comp(5423..5533)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_047_000G1_scaffold_3008_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5697..6566)
DNA (870bp) protein (290aa)
short-chain dehydrogenase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288ED77
Uncharacterized protein {ECO:0000313|EMBL:EOR20024.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
short chain dehydrogenase family protein
L2_047_000G1_scaffold_3008_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6696..7595)
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T963_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ56393.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RpiR family transcriptional regulator
L2_047_000G1_scaffold_3008_11
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7718..8260)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKK3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67428.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000G1_scaffold_3008_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8271..8981)
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F9M4_9CLOT
pseudouridine synthase family protein
L2_047_000G1_scaffold_3008_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9127..9945
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQE9_CLOPF
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
AP endonuclease
L2_047_000G1_scaffold_3008_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10043..10252)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV80_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24624.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_3008_15
unknown

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comp(10345..10635)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying 15 items

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