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L2_047_000G1_scaffold_1207

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1207_1
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..714)
DNA (714bp) protein (238aa)
bglC; Aryl-phospho-beta-D-glucosidase bglC (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SGX1_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFP63228.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L2_047_000G1_scaffold_1207_2
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(707..1054)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2QNP9_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH98157.1}; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA-383.;"
PTS system transporter subunit IIA
L2_047_000G1_scaffold_1207_3
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1047..2297)
DNA (1251bp) protein (417aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SQQ7_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
PTS system, cellobiose-specific IIC component
L2_047_000G1_scaffold_1207_4
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2353..2664)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2XPK8_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI56829.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
PTS system, cellobiose-specific IIB component
L2_047_000G1_scaffold_1207_5
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2771..4774
DNA (2004bp) protein (668aa)
PRD domain protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SQQ6_9FIRM
PRD domain protein {ECO:0000313|EMBL:EFP60098.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
transcriptional antiterminator
L2_047_000G1_scaffold_1207_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5798..9196)
DNA (3399bp) protein (1133aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75969.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_047_000G1_scaffold_1207_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9965..11896
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGH6_CLOBU
L2_047_000G1_scaffold_1207_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12051..12983)
DNA (933bp) protein (311aa)
Fructokinase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G015_CLOPA
Fructokinase {ECO:0000313|EMBL:ETD69012.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
fructokinase
L2_047_000G1_scaffold_1207_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12996..14483)
DNA (1488bp) protein (496aa)
scrB; Sucrose-6-phosphate hydrolase (Sucrase)(Invertase) (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9Z0_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EKQ54394.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_047_000G1_scaffold_1207_10
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14507..15934)
DNA (1428bp) protein (476aa)
PTS system, sucrose-specific, EIIBCA component family protein n=2 Tax=Turicibacter RepID=D4W556_9FIRM
PTS system, sucrose-specific, EIIBCA component family protein {ECO:0000313|EMBL:EFF64047.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
pts system, sucrose-specific, eiibca component family protein
L2_047_000G1_scaffold_1207_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16103..17095)
DNA (993bp) protein (331aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2C2_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ54392.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
scrR; Transcriptional regulator, LacI family
L2_047_000G1_scaffold_1207_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17332..18666)
DNA (1335bp) protein (445aa)
UPI0003D60B64 related cluster n=1 Tax=unknown RepID=UPI0003D60B64
Uncharacterized protein {ECO:0000313|EMBL:KJZ87160.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
L2_047_000G1_scaffold_1207_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18834..19403)
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:AIY84915.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:AIY84915.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
5,10-methenyltetrahydrofolate synthetase n=3 Tax=Clostridium butyricum RepID=B1R040_CLOBU
L2_047_000G1_scaffold_1207_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19482..20609)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XLW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71807.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_047_000G1_scaffold_1207_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20700..21677)
DNA (978bp) protein (326aa)
Homoserine dehydrogenase (EC:1.1.1.3)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96536.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_047_000G1_scaffold_1207_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21925..23220)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
putative aminopeptidase 2 (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium colicanis 209318 RepID=N9XTW4_9CLOT
L2_047_000G1_scaffold_1207_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23268..24422)
DNA (1155bp) protein (385aa)
N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJC5_CLOPF
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:EDT25942.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
N-acetylmuramoyl-L-alanine amidase
L2_047_000G1_scaffold_1207_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24579..25763
DNA (1185bp) protein (395aa)
Cation efflux family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVE7_CLOPS
cation efflux family protein
Cation efflux family protein {ECO:0000313|EMBL:ABG87538.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_047_000G1_scaffold_1207_19
unknown

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comp(25885..26415)
DNA (531bp) protein (177aa)

This feature has no annotations

L2_047_000G1_scaffold_1207_20
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26634..27356)
DNA (723bp) protein (241aa)
Amino acid ABC transporter ATP-binding protein, PAAT family n=1 Tax=Clostridium intestinale URNW RepID=U2PT36_9CLOT
Amino acid ABC transporter ATP-binding protein, PAAT family {ECO:0000313|EMBL:ERK29590.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter family protein
Displaying 20 items

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