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L2_047_000G1_scaffold_1223

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1223_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..266
DNA (264bp) protein (88aa)
Integrase catalytic region n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7E9_9CLOT
Integrase catalytic region {ECO:0000313|EMBL:EHJ02128.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
IS1470, transposase
L2_047_000G1_scaffold_1223_2
Jeotgalibacillus campisalis, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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527..1867
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Bacillus RepID=U5LII7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KIL43068.1}; TaxID=220754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus campisalis.;"
hypothetical protein
L2_047_000G1_scaffold_1223_3
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1910..3760
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R3K8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO58792.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
S-layer domain-containing protein
L2_047_000G1_scaffold_1223_4
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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3828..5306
DNA (1479bp) protein (493aa)
Family 1 extracellular solute-binding protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FLM6_9BACT
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:ERJ13650.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
family 1 extracellular solute-binding protein
L2_047_000G1_scaffold_1223_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5507..6130
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036CB881
Uncharacterized protein {ECO:0000313|EMBL:EDK23854.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Predicted integral membrane protein
L2_047_000G1_scaffold_1223_6
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6229..7200
DNA (972bp) protein (324aa)
protein lplB n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288A643
Protein lplB {ECO:0000313|EMBL:KEQ26789.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
binding-protein-dependent transport systems inner membrane component
L2_047_000G1_scaffold_1223_7
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7216..8085
DNA (870bp) protein (290aa)
ABC transporter permease n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A0D99
ABC transporter, permease protein {ECO:0000313|EMBL:EGL19213.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
binding-protein-dependent transport systems inner membrane component
L2_047_000G1_scaffold_1223_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8168..9673
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Thermoanaerobacter indiensis RepID=UPI00035C9C9C
Uncharacterized protein {ECO:0000313|EMBL:EOR24434.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_047_000G1_scaffold_1223_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9711..10391
DNA (681bp) protein (227aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CZF1_THEYO
N-acetylmannosamine-6-phosphate 2-epimerase
L2_047_000G1_scaffold_1223_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10393..11295
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6Q9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35561.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative N-acetylmannosamine kinase
L2_047_000G1_scaffold_1223_11
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11243..11980
DNA (738bp) protein (246aa)
Lipolytic protein G-D-S-L family n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CUK6_PAESJ
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACT01210.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L2_047_000G1_scaffold_1223_12
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11996..12544
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=F5LJ83_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGL17580.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
signal peptide
L2_047_000G1_scaffold_1223_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12570..13373
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99732.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RpiR family phosphosugar-binding transcriptional regulator
L2_047_000G1_scaffold_1223_14
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13431..14540
DNA (1110bp) protein (370aa)
msmX; maltodextrin import ATP-binding protein MsmX (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EIT0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI94532.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_047_000G1_scaffold_1223_15
unknown

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comp(14588..15079)
DNA (492bp) protein (164aa)

This feature has no annotations

L2_047_000G1_scaffold_1223_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15193..15885
DNA (693bp) protein (231aa)
Putative metal-dependent phosphoesterase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C5B7_9CLOT
Putative metal-dependent phosphoesterase {ECO:0000313|EMBL:EOR24473.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative metal-dependent phosphoesterase
L2_047_000G1_scaffold_1223_17
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15921..16586
DNA (666bp) protein (222aa)
XRE family transcriptional regulator n=1 Tax=Clostridium tunisiense RepID=UPI00031A8B2C
XRE family transcriptional regulator {ECO:0000313|EMBL:KGK88322.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
DNA-binding response regulator
L2_047_000G1_scaffold_1223_18
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16583..17596
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
Sensor histidine kinase n=1 Tax=Clostridium sp. BL8 RepID=T0PQ74_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_047_000G1_scaffold_1223_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17686..18477
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98087.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter
L2_047_000G1_scaffold_1223_20
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18467..20482
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI00031CFF24
ABC transporter {ECO:0000313|EMBL:KEZ85053.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ABC transporter
L2_047_000G1_scaffold_1223_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20528..23176)
DNA (2649bp) protein (883aa)
Putative ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6C9_9CLOT
HAD ATPase, P-type, IC family protein {ECO:0000313|EMBL:AIY83590.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
HAD ATPase, P-type, IC family protein
L2_047_000G1_scaffold_1223_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23491..24558
DNA (1068bp) protein (356aa)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:CDH89328.1}; EC=2.7.7.22 {ECO:0000313|EMBL:CDH89328.1};; Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ACD24435.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Mannose-1-phosphate guanylyltransferase n=2 Tax=Clostridium botulinum B RepID=U4P1N4_CLOBO
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
L2_047_000G1_scaffold_1223_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24916..25275
DNA (360bp) protein (120aa)
Putative transcriptional repressor SmtB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKR9_9CLOT
Putative transcriptional repressor SmtB {ECO:0000313|EMBL:EKY28594.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cadmium efflux system accessory protein
L2_047_000G1_scaffold_1223_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25292..26818
DNA (1527bp) protein (509aa)
cadA; cadmium-translocating P-type ATPase (EC:3.6.3.3)
Cadmium-translocating P-type ATPase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFD5_9CLOT
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EOR28064.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Displaying 24 items

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