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L2_047_000G1_scaffold_1302

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1302_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(194..1315)
DNA (1122bp) protein (374aa)
Stage V sporulation protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDV8_9CLOT
ftsW; cell division protein FtsW
Stage V sporulation protein E {ECO:0000313|EMBL:KJU71307.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1302_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1341..2315)
DNA (975bp) protein (325aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URY3_CLOBO
L2_047_000G1_scaffold_1302_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2352..3716)
DNA (1365bp) protein (455aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:AIY82960.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y275_9CLOT
L2_047_000G1_scaffold_1302_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3809..5266)
DNA (1458bp) protein (486aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=2 Tax=Clostridium botulinum B RepID=B2TS27_CLOBB
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
L2_047_000G1_scaffold_1302_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5306..7525)
DNA (2220bp) protein (740aa)
Stage V sporulation protein D n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4V8_CLOBA
stage V sporulation protein D
Stage V sporulation protein D {ECO:0000313|EMBL:KJU71304.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1302_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7590..8090)
DNA (501bp) protein (167aa)
Cell division protein FtsL n=1 Tax=Clostridium intestinale URNW RepID=U2PWW4_9CLOT
cell division FtsL family protein
Cell division FtsL family protein {ECO:0000313|EMBL:AIY84105.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_1302_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8125..9057)
DNA (933bp) protein (311aa)
rsmH; 16S rRNA methyltransferase (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVN7_CLOSA
L2_047_000G1_scaffold_1302_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9070..9498)
DNA (429bp) protein (143aa)
Protein MraZ n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EL01_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
cell division protein MraZ
L2_047_000G1_scaffold_1302_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9696..10823)
DNA (1128bp) protein (376aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRV8_CLOPS
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_047_000G1_scaffold_1302_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11219..12001
DNA (783bp) protein (261aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3F5_9CLOT
pdaA; delta-lactam-biosynthetic de-N-acetylase
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:KJU71299.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1302_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12267..12914)
DNA (648bp) protein (216aa)
Putative Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ERT8_9CLOT
formiminotransferase-cyclodeaminase family protein
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:KJU71298.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1302_12
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12987..13523)
DNA (537bp) protein (179aa)
Nitroreductase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW88_9CLOT
noxC; nitroreductase family protein
Nitroreductase {ECO:0000313|EMBL:EET86502.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_047_000G1_scaffold_1302_13
Clostridium haemolyticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13625..14743)
DNA (1119bp) protein (373aa)
Glycosyltransferase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTH0_CLOBO
Glycosyl transferase {ECO:0000313|EMBL:KGN04875.1}; TaxID=1443115 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium haemolyticum NCTC 8350.;"
glycosyltransferase
L2_047_000G1_scaffold_1302_14
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14749..16155)
DNA (1407bp) protein (469aa)
Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTH1_CLOBO
Teichoic acid transporter {ECO:0000313|EMBL:KEI06980.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
polysaccharide biosynthesis protein
L2_047_000G1_scaffold_1302_15
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16219..17436)
DNA (1218bp) protein (406aa)
O-antigen polymerase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SMZ4_CLOC7
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADL51860.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_047_000G1_scaffold_1302_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17459..18166)
DNA (708bp) protein (236aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.-)
UDP-N-acetyl-D-mannosaminuronic acid transferase n=1 Tax=Clostridium botulinum RepID=UPI00030717F4
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000313|EMBL:KIN82784.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_1302_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18178..19332)
DNA (1155bp) protein (385aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY2_CLOSA
tetratricopeptide TPR_2 repeat protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:AGX42233.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_1302_18
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19359..21077)
DNA (1719bp) protein (573aa)
pgcA; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6FWA9_9CLOT
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit {ECO:0000313|EMBL:CDB16380.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L2_047_000G1_scaffold_1302_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21206..21793)
DNA (588bp) protein (196aa)
50S ribosomal protein L25 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FA59_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ribosomal protein L25, Ctc-form
L2_047_000G1_scaffold_1302_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22003..23484
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97626.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Orn/Lys/Arg decarboxylase major region
L2_047_000G1_scaffold_1302_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23595..25079)
DNA (1485bp) protein (495aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6L129_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDB75866.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
L2_047_000G1_scaffold_1302_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25101..25544)
DNA (444bp) protein (148aa)
Purine nucleoside phosphorylase n=3 Tax=Clostridium butyricum RepID=B1QTU5_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ83176.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 22 items

View Taxonomy