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L2_047_000G1_scaffold_1589

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1589_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(466..1425)
DNA (960bp) protein (320aa)
Putative voltage gated chloride channel family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0V2_CLOBU
Chloride channel {ECO:0000313|EMBL:KJZ86691.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative voltage gated chloride channel family
L2_047_000G1_scaffold_1589_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1413..1724)
DNA (312bp) protein (104aa)
Putative voltage gated chloride channel family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0V2_CLOBU
Chloride channel {ECO:0000313|EMBL:KJZ86691.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative voltage gated chloride channel family
L2_047_000G1_scaffold_1589_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2048..2392)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20487.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_047_000G1_scaffold_1589_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2817..3005
DNA (189bp) protein (63aa)
Ribosomal protein L25, Ctc-form n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H837_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
L2_047_000G1_scaffold_1589_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3271..4437
DNA (1167bp) protein (389aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHA4_9CLOT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EKY27338.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sodium:dicarboxylate symporter family protein
L2_047_000G1_scaffold_1589_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4545..4943)
DNA (399bp) protein (133aa)
beta-hexosaminidase (EC:3.2.1.52)
beta-N-acetylhexosaminidase n=1 Tax=Clostridium botulinum RepID=UPI000381F8C3
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:KIL09600.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_1589_7
unknown

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comp(5474..5647)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_047_000G1_scaffold_1589_8
unknown

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comp(5649..5843)
DNA (195bp) protein (65aa)

This feature has no annotations

L2_047_000G1_scaffold_1589_9
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5963..6742)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVK1_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV68590.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L2_047_000G1_scaffold_1589_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7020..7799)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KLK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB76053.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
iron ABC transporter ATP-binding protein
L2_047_000G1_scaffold_1589_11
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7799..8773)
DNA (975bp) protein (325aa)
Iron chelate uptake ABC transporter FeCT family permease protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GLB8_9CLOT
iron ABC transporter permease
Iron ABC transporter permease {ECO:0000313|EMBL:CDM67415.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000G1_scaffold_1589_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8784..9692)
DNA (909bp) protein (303aa)
Ferrichrome ABC transporter n=3 Tax=Clostridium perfringens RepID=Q8XNV9_CLOPE
iron chelate uptake ABC transporter solute-binding protein
Ferrichrome ABC transporter {ECO:0000313|EMBL:BAB79929.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_047_000G1_scaffold_1589_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9695..10258)
DNA (564bp) protein (188aa)
Sortase family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABN2_9FIRM
Sortase family protein {ECO:0000313|EMBL:EDQ96015.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sortase
L2_047_000G1_scaffold_1589_14
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10315..11811)
DNA (1497bp) protein (499aa)
Cell wall anchor domain protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LPN5_9CLOT
Cell wall anchor domain protein {ECO:0000313|EMBL:CDB76057.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
cell wall anchor domain-containing protein
L2_047_000G1_scaffold_1589_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11982..12701
DNA (720bp) protein (240aa)
Transcriptional regulator, AraC family n=6 Tax=Clostridium perfringens RepID=Q0TUL8_CLOP1
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:EIA18501.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_047_000G1_scaffold_1589_16
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12718..13485)
DNA (768bp) protein (256aa)
4Fe-4S ferredoxin n=1 Tax=[Clostridium] glycolicum RepID=UPI00036A896E
4Fe-4S ferredoxin {ECO:0000313|EMBL:KHS56833.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L2_047_000G1_scaffold_1589_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13598..14845)
DNA (1248bp) protein (416aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97972.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_047_000G1_scaffold_1589_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14856..15116)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3S3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97973.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_1589_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15540..15779)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZRL6_CLOB0
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEI99017.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
L2_047_000G1_scaffold_1589_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15836..17230)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E1R4_CLOK1
Histidine kinase {ECO:0000313|EMBL:KJU72985.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
HAMP domain protein
L2_047_000G1_scaffold_1589_21
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17184..17882)
DNA (699bp) protein (233aa)
Two-component response regulator n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQL4_CLOPS
Transcriptional regulator {ECO:0000313|EMBL:KEZ87120.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
two-component response regulator
L2_047_000G1_scaffold_1589_22
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18047..18967)
DNA (921bp) protein (307aa)
Cell division protein FtsX n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CXJ6_THETY
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000G1_scaffold_1589_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18982..20121)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037BD5BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68266.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000G1_scaffold_1589_24
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20416..20703)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MXJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KAJ51423.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein DUF4176
L2_047_000G1_scaffold_1589_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20723..21340)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1ME16_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56159.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Displaying 25 items

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