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L2_047_000G1_scaffold_1598

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1598_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D2A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90915.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
lipoprotein
L2_047_000G1_scaffold_1598_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(365..1786)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sensor histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1X1_9CLOT
L2_047_000G1_scaffold_1598_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1776..2474)
DNA (699bp) protein (233aa)
Putative transcriptional regulatory protein WalR n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E963_9FIRM
Putative transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERI90917.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
transcriptional regulatory protein ResD
L2_047_000G1_scaffold_1598_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2739..3569
DNA (831bp) protein (277aa)
HTH DNA-binding protein n=2 Tax=Clostridium botulinum B RepID=B2TIN5_CLOBB
HTH DNA-binding protein
Transcriptional regulator {ECO:0000313|EMBL:KIL08600.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_1598_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3658..3963
DNA (306bp) protein (102aa)
TrpR-like protein YerC/YecD n=1 Tax=Clostridium colicanis 209318 RepID=N9XXU8_9CLOT
TrpR like protein, YerC/YecD
TrpR-like protein YerC/YecD {ECO:0000313|EMBL:ENZ00709.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_047_000G1_scaffold_1598_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4047..5396
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Phosphoglucosamine mutase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=GLMM_CLOB8
glmM; phosphoglucosamine mutase
L2_047_000G1_scaffold_1598_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6293..6793
DNA (501bp) protein (167aa)
Acetolactate synthase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FZY0_CLOPA
Acetolactate synthase {ECO:0000313|EMBL:ETD69263.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
acetolactate synthase, small subunit
L2_047_000G1_scaffold_1598_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6828..8423
DNA (1596bp) protein (532aa)
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLT8_9CLOT
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:EKY28537.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
alpha-isopropylmalate/homocitrate synthase family transferase
L2_047_000G1_scaffold_1598_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8440..9699
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
leuC2; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridium butyricum RepID=M8J5X1_CLOBU
L2_047_000G1_scaffold_1598_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9713..10204
DNA (492bp) protein (164aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01032}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01032};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01032}; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=LEUD_CLOBA
L2_047_000G1_scaffold_1598_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10220..11302
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
leuB; 3-isopropylmalate dehydrogenase LeuB (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HED9_9CLOT
L2_047_000G1_scaffold_1598_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11306..12964
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ilvD1; dihydroxy-acid dehydratase IlvD (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKN7_9CLOT
L2_047_000G1_scaffold_1598_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12991..14664
DNA (1674bp) protein (558aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EHI97228.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EHI97228.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBQ1_9CLOT
L2_047_000G1_scaffold_1598_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14684..15685
DNA (1002bp) protein (334aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ilvC; ketol-acid reductoisomerase IlvC (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG82_9CLOT
L2_047_000G1_scaffold_1598_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16025..16504
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=7 Tax=Clostridium difficile RepID=G6BC21_CLODI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EHJ26827.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
MarR family transcriptional regulator
L2_047_000G1_scaffold_1598_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16525..18747
DNA (2223bp) protein (741aa)
ABC transporter family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D8P6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQF24279.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ABC transporter ATP-binding protein/permease
L2_047_000G1_scaffold_1598_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18740..20608
DNA (1869bp) protein (623aa)
ABC-type transport system, multidrug-family ATP-binding/permease {ECO:0000313|EMBL:CCK90987.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCK90987.1};; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
ABC transporter, ATP-binding protein n=5 Tax=Clostridium difficile RepID=D5Q387_CLODI
ABC transporter ATP-binding/permease protein
L2_047_000G1_scaffold_1598_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20699..20971
DNA (273bp) protein (91aa)
GIY-YIG catalytic domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPA5_9CLOT
GIY-YIG catalytic domain protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71805.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Displaying 18 items

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