name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_047_000G1_scaffold_1618_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2..97
----------------- DNA (96bp) protein (32aa) |
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1N2_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
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L2_047_000G1_scaffold_1618_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
698..1006
----------------- DNA (309bp) protein (103aa) |
30S ribosomal protein S10 n=2 Tax=Clostridium RepID=L1QIL1_9CLOT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsJ; 30S ribosomal protein S10
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L2_047_000G1_scaffold_1618_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1085..1714
----------------- DNA (630bp) protein (210aa) |
50S ribosomal protein L3 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F318_9CLOT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplC; 50S ribosomal protein L3
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L2_047_000G1_scaffold_1618_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1742..2362
----------------- DNA (621bp) protein (207aa) |
50S ribosomal protein L4 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPE4_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplD; 50S ribosomal protein L4
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L2_047_000G1_scaffold_1618_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2362..2658
----------------- DNA (297bp) protein (99aa) |
50S ribosomal protein L23 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FD93_9CLOT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplW; 50S ribosomal protein L23
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L2_047_000G1_scaffold_1618_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2720..3553
----------------- DNA (834bp) protein (278aa) |
50S ribosomal protein L2 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQD9_9CLOT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplB; 50S ribosomal protein L2
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L2_047_000G1_scaffold_1618_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3618..3896
----------------- DNA (279bp) protein (93aa) |
30S ribosomal protein S19 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ03_9CLOT
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
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L2_047_000G1_scaffold_1618_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3926..4261
----------------- DNA (336bp) protein (112aa) |
50S ribosomal protein L22 n=1 Tax=Clostridium colicanis 209318 RepID=N9XXY9_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplV; ribosomal protein L22
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L2_047_000G1_scaffold_1618_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4281..4946
----------------- DNA (666bp) protein (222aa) |
30S ribosomal protein S3 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8N9_9CLOT
rpsC; ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
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L2_047_000G1_scaffold_1618_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4964..5398
----------------- DNA (435bp) protein (145aa) |
50S ribosomal protein L16 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF22_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplP; 50S ribosomal protein L16
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L2_047_000G1_scaffold_1618_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5398..5607
----------------- DNA (210bp) protein (70aa) |
50S ribosomal protein L29 n=11 Tax=Clostridium perfringens RepID=RL29_CLOP1
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
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L2_047_000G1_scaffold_1618_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5629..5886
----------------- DNA (258bp) protein (86aa) |
30S ribosomal protein S17 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF77_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rpsQ; 30S ribosomal protein S17
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L2_047_000G1_scaffold_1618_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5916..6284
----------------- DNA (369bp) protein (123aa) |
50S ribosomal protein L14 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F324_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplN; 50S ribosomal protein L14
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L2_047_000G1_scaffold_1618_14
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
6302..6616
----------------- DNA (315bp) protein (105aa) |
50S ribosomal protein L24 n=1 Tax=Clostridium colicanis 209318 RepID=N9XM56_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplX; ribosomal protein L24
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L2_047_000G1_scaffold_1618_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
6640..7179
----------------- DNA (540bp) protein (180aa) |
50S ribosomal protein L5 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MC46_9CLOT
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
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L2_047_000G1_scaffold_1618_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7414..7812
----------------- DNA (399bp) protein (133aa) |
30S ribosomal protein S8 n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXX3_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
rpsH; 30S ribosomal protein S8
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L2_047_000G1_scaffold_1618_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7883..8425
----------------- DNA (543bp) protein (181aa) |
50S ribosomal protein L6 n=2 Tax=Clostridium botulinum E RepID=RL6_CLOBA
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
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L2_047_000G1_scaffold_1618_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
8444..8803
----------------- DNA (360bp) protein (120aa) |
50S ribosomal protein L18 n=1 Tax=Clostridium colicanis 209318 RepID=N9XM52_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplR; 50S ribosomal protein L18
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L2_047_000G1_scaffold_1618_19
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8823..9320
----------------- DNA (498bp) protein (166aa) |
30S ribosomal protein S5 n=2 Tax=environmental samples RepID=R6KUD7_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
rpsE; 30S ribosomal protein S5
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L2_047_000G1_scaffold_1618_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9334..9513
----------------- DNA (180bp) protein (60aa) |
50S ribosomal protein L30 n=2 Tax=Clostridium RepID=K6TX22_9CLOT
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
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L2_047_000G1_scaffold_1618_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9535..9975
----------------- DNA (441bp) protein (147aa) |
50S ribosomal protein L15 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML62_CLOSA
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
rplO; 50S ribosomal protein L15
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L2_047_000G1_scaffold_1618_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9977..11248
----------------- DNA (1272bp) protein (424aa) |
Protein translocase subunit SecY n=1 Tax=Clostridium colicanis 209318 RepID=N9XXX8_9CLOT
secY; preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
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L2_047_000G1_scaffold_1618_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11272..11919
----------------- DNA (648bp) protein (216aa) |
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Adenylate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XM49_9CLOT
adenylate kinase family protein
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L2_047_000G1_scaffold_1618_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11919..12668
----------------- DNA (750bp) protein (250aa) |
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H244_9CLOT
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L2_047_000G1_scaffold_1618_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13025..13243
----------------- DNA (219bp) protein (73aa) |
Translation initiation factor IF-1 n=14 Tax=Clostridium RepID=IF1_CLOB8
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075, ECO:0000313|EMBL:AIY79161.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
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L2_047_000G1_scaffold_1618_26
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13287..13400
----------------- DNA (114bp) protein (38aa) |
50S ribosomal protein L36 n=4 Tax=Clostridium RepID=L1QJU0_9CLOT
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
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L2_047_000G1_scaffold_1618_27
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13624..13989
----------------- DNA (366bp) protein (122aa) |
30S ribosomal protein S13 n=2 Tax=environmental samples RepID=R6G0M9_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
rpsM; 30S ribosomal protein S13
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L2_047_000G1_scaffold_1618_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14005..14400
----------------- DNA (396bp) protein (132aa) |
30S ribosomal protein S11 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FDB1_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rpsK; 30S ribosomal protein S11
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L2_047_000G1_scaffold_1618_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14428..15048
----------------- DNA (621bp) protein (207aa) |
30S ribosomal protein S4 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQF3_9CLOT
rpsD; ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
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L2_047_000G1_scaffold_1618_30
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15151..16098
----------------- DNA (948bp) protein (316aa) |
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium intestinale URNW RepID=U2Q8E9_9CLOT
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