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L2_047_000G1_scaffold_1734

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1734_1
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..187
DNA (186bp) protein (62aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K780_9FIRM
L2_047_000G1_scaffold_1734_2
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(259..1164)
DNA (906bp) protein (302aa)
33 kDa chaperonin n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KD98_9FIRM
Disulfide bond chaperones of the HSP33 family
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L2_047_000G1_scaffold_1734_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1166..1915)
DNA (750bp) protein (250aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:AGX43718.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43718.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative methyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT58_CLOSA
L2_047_000G1_scaffold_1734_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1982..2233)
DNA (252bp) protein (84aa)
Small acid-soluble spore protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G4C6_9CLOT
small acid-soluble spore protein alpha/beta family protein
Small acid-soluble spore protein {ECO:0000313|EMBL:CDB16354.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L2_047_000G1_scaffold_1734_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2411..3400
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y248_9CLOT
L2_047_000G1_scaffold_1734_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3417..4295
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Clostridium botulinum E RepID=B2V5A8_CLOBA
L2_047_000G1_scaffold_1734_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4307..5062
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7P7_9CLOT
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
L2_047_000G1_scaffold_1734_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5476..5991)
DNA (516bp) protein (172aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XQB4_9CLOT
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ENZ01908.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ATP:corrinoid adenosyltransferase
L2_047_000G1_scaffold_1734_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6108..6827
DNA (720bp) protein (240aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase DapH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVQ8_CLOSA
L2_047_000G1_scaffold_1734_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6990..7646)
DNA (657bp) protein (219aa)
Single-strand binding protein/primosomal replication protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW92_CLOSA
single-strand binding family protein
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KJU71261.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1734_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7754..8530)
DNA (777bp) protein (259aa)
Polysaccharide deacetylase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT67_CLOSA
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AGX43728.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000G1_scaffold_1734_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8613..9146
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TS81_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71260.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1734_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9139..10020)
DNA (882bp) protein (294aa)
Putative=40-residue YVTN family beta-propeller repeat protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ES21_9CLOT
Putative=40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:CDG01975.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_047_000G1_scaffold_1734_14
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10175..10423
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19273.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_047_000G1_scaffold_1734_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10475..12361)
DNA (1887bp) protein (629aa)
HIRAN domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7Q7_9CLOT
HIRAN domain-containing protein {ECO:0000313|EMBL:EHJ00208.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_047_000G1_scaffold_1734_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12387..13694)
DNA (1308bp) protein (436aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Protein FolC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAI1_9CLOT
Protein FolC {ECO:0000313|EMBL:EKY24632.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_047_000G1_scaffold_1734_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13842..15614)
DNA (1773bp) protein (591aa)
Oligoendopeptidase F n=2 Tax=Clostridium botulinum B RepID=B2TMP2_CLOBB
Oligoendopeptidase, pepF/M3 family protein {ECO:0000313|EMBL:AIY81706.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
oligoendopeptidase F
L2_047_000G1_scaffold_1734_18
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15762..17204)
DNA (1443bp) protein (481aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FP16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14963.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L2_047_000G1_scaffold_1734_19
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17331..17741
DNA (411bp) protein (137aa)
Helix-turn-helix family protein n=1 Tax=Haemophilus parasuis 12939 RepID=U4S8V2_HAEPR
hypothetical protein
Helix-turn-helix family protein {ECO:0000313|EMBL:EQA06345.1}; TaxID=1275968 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parasuis 12939.;"
L2_047_000G1_scaffold_1734_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17794..18276
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FNP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14868.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L2_047_000G1_scaffold_1734_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18362..19426)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99368.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC-2 type transporter family protein
Displaying 21 items

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