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L2_047_000G1_scaffold_1766

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1766_1
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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172..633
DNA (462bp) protein (154aa)
HEPN domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X8G5_THEPJ
HEPN domain-containing protein
HEPN domain protein {ECO:0000313|EMBL:ADG82841.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
L2_047_000G1_scaffold_1766_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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953..2818
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y0D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01287.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
radical SAM superfamily protein
L2_047_000G1_scaffold_1766_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2787..3497
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R1A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96905.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_047_000G1_scaffold_1766_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3512..4948
DNA (1437bp) protein (479aa)
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2H2_9CLOT
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EKQ55111.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ribonuclease, Rne/Rng family domain protein
L2_047_000G1_scaffold_1766_5
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5158..6597
DNA (1440bp) protein (480aa)
Glycoside hydrolase family protein n=1 Tax=Serratia marcescens VGH107 RepID=M3AL50_SERMA
Chitinase {ECO:0000313|EMBL:KFF76982.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
glycoside hydrolase family protein
L2_047_000G1_scaffold_1766_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6970..7278
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium colicanis 209318 RepID=N9XZF6_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplU; 50S ribosomal protein L21
L2_047_000G1_scaffold_1766_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7284..7655
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0A6_CLOBA
hypothetical protein
Ribosomal protein {ECO:0000313|EMBL:KIL08822.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_1766_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7659..7958
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=RL27_CLOB8
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_047_000G1_scaffold_1766_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8130..9416
DNA (1287bp) protein (429aa)
GTPase Obg n=1 Tax=Clostridium colicanis 209318 RepID=N9WE18_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cgtA; Obg family GTPase CgtA
L2_047_000G1_scaffold_1766_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9433..9738
DNA (306bp) protein (102aa)
Putative CRS1/YhbY domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN08_9CLOT
Putative CRS1/YhbY domain protein {ECO:0000313|EMBL:CDG02577.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
CRS1 / YhbY domain protein
L2_047_000G1_scaffold_1766_11

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9740..10342
DNA (603bp) protein (201aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=3 Tax=Clostridium butyricum RepID=B1R1B2_CLOBU
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:ETJ16738.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000G1_scaffold_1766_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10344..10913
DNA (570bp) protein (190aa)
Putative HD superfamily hydrolase of NAD metabolism n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLH4_CLOSA
HD domain protein
HD domain protein {ECO:0000313|EMBL:AIY83684.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_1766_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10927..12336
DNA (1410bp) protein (470aa)
Membrane-bound protein LytR n=2 Tax=Clostridium botulinum B RepID=B2TKI5_CLOBB
membrane-bound protein LytR
Membrane-bound protein LytR {ECO:0000313|EMBL:ACD24945.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_1766_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12338..13240
DNA (903bp) protein (301aa)
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
RNA pseudouridine synthase YjbO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPP0_CLOSA
L2_047_000G1_scaffold_1766_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13242..14555)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WEL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71662.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
D-alanyl-D-alanine carboxypeptidase family protein
L2_047_000G1_scaffold_1766_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14702..15301
DNA (600bp) protein (200aa)
competence protein ComEA n=1 Tax=Clostridium botulinum RepID=UPI00037B5E59
Competence protein ComEA {ECO:0000313|EMBL:KIL08831.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
ComE operon protein 1
L2_047_000G1_scaffold_1766_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15384..16103
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLH7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71664.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_1766_18
unknown

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16161..16454
DNA (294bp) protein (98aa)

This feature has no annotations

L2_047_000G1_scaffold_1766_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16464..17819
DNA (1356bp) protein (452aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium botulinum E RepID=B2V0B8_CLOBA
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AIY82541.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_1766_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18671..18928
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97836.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycosyl hydrolase 1 family protein
Displaying 20 items

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