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L2_047_000G1_scaffold_1922

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1922_1
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(470..1450)
DNA (981bp) protein (327aa)
DNA replication protein DnaC, putative n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M3J5_CLOB8
DNA replication protein DnaC
DNA replication protein DnaC, putative {ECO:0000313|EMBL:ABR37175.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_047_000G1_scaffold_1922_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1443..2435)
DNA (993bp) protein (331aa)
DNA replication protein DnaD n=2 Tax=Clostridium botulinum B RepID=B2TRD8_CLOBB
DNA replication protein DnaD {ECO:0000313|EMBL:KJU71758.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DnaD domain protein
L2_047_000G1_scaffold_1922_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2600..3778
DNA (1179bp) protein (393aa)
Peptidase, M23/M37 family n=2 Tax=Clostridium botulinum B RepID=B2TRD7_CLOBB
peptidase, M23/M37 family
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CDH92422.1}; Peptidase, M23/M37 family {ECO:0000313|EMBL:ACD23126.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_1922_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3775..4968)
DNA (1194bp) protein (398aa)
Subtilase family protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVX3_CLOBO
subtilase family protein
Putative alkaline serine protease {ECO:0000313|EMBL:CDH92421.1}; Subtilase family protein {ECO:0000313|EMBL:ACD22144.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_1922_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5062..5877)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XKM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00218.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
beta-lactamase superfamily domain protein
L2_047_000G1_scaffold_1922_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5894..6325)
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52441.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_047_000G1_scaffold_1922_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6414..6866)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99686.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dUTPase superfamily
L2_047_000G1_scaffold_1922_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7034..7576)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR24516.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_047_000G1_scaffold_1922_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7897..9162
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTG8_CLOBU
L2_047_000G1_scaffold_1922_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9179..9970
DNA (792bp) protein (264aa)
yycJ; putative metallo-hydrolase YycJ (EC:3.-.-.-)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XKM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00223.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_047_000G1_scaffold_1922_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10002..10499
DNA (498bp) protein (166aa)
Preprotein translocase subunit SecA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N823_9CLOT
preprotein translocase subunit SecA
Preprotein translocase subunit SecA {ECO:0000313|EMBL:AGF59517.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_1922_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10584..11225
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99692.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_1922_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11296..11835
DNA (540bp) protein (180aa)
Heat shock protein n=1 Tax=Clostridium intestinale URNW RepID=U2PQ94_9CLOT
Heat shock protein {ECO:0000313|EMBL:ERK28585.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L2_047_000G1_scaffold_1922_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11899..12378
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENZ8_9CLOT
rlmH; rRNA large subunit m3Psi methyltransferase RlmH
L2_047_000G1_scaffold_1922_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12773..13282
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLP2_CLOBB
GrpB family protein {ECO:0000313|EMBL:AIY80467.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
protein YqkA
L2_047_000G1_scaffold_1922_16
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13487..14122)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3M6_9CLOT
Putative NADH-flavin reductase {ECO:0000313|EMBL:EXG88405.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
putative NADH-flavin reductase
L2_047_000G1_scaffold_1922_17
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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14245..14589
DNA (345bp) protein (115aa)
Transcription regulator (Putative) n=1 Tax=Lactobacillus plantarum (strain JDM1) RepID=C6VL74_LACPJ
transcription regulator ()
Transcription regulator (Putative) {ECO:0000313|EMBL:AHN70226.1}; TaxID=1300221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum DOMLa.;"
L2_047_000G1_scaffold_1922_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14793..15134
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H593_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99616.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_1922_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15154..15459
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99634.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_1922_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15604..15912
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99619.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_1922_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15943..16212
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81678.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Displaying 21 items

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