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L2_047_000G1_scaffold_622

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_622_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..475)
DNA (474bp) protein (158aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Clostridium botulinum E RepID=CLPX_CLOBA
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_047_000G1_scaffold_622_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(504..1103)
DNA (600bp) protein (200aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridium botulinum B RepID=CLPP_CLOBB
L2_047_000G1_scaffold_622_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1242..2531)
DNA (1290bp) protein (430aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:AIY82665.1};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
trigger factor n=1 Tax=Clostridium botulinum RepID=UPI0002F662F0
L2_047_000G1_scaffold_622_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2655..3503)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M299_9CLOT
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AIY82531.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_622_5
unknown

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comp(3592..4272)
DNA (681bp) protein (227aa)

This feature has no annotations

L2_047_000G1_scaffold_622_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4700..5974)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Y2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99085.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase, M23/M37 family protein
L2_047_000G1_scaffold_622_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5995..7227)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WKB1_9CLOT
PEGA domain protein
PEGA domain protein {ECO:0000313|EMBL:AIY83993.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_622_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7246..7587)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2Z1_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72614.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_622_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7738..8457)
DNA (720bp) protein (240aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82887.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_622_10
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8535..8861)
DNA (327bp) protein (109aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hisE; phosphoribosyl-ATP diphosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Clostridium intestinale URNW RepID=U2NKS2_9CLOT
L2_047_000G1_scaffold_622_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8873..9211)
DNA (339bp) protein (113aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hisI; phosphoribosyl-AMP cyclohydrolase HisI (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IK57_CLOBU
L2_047_000G1_scaffold_622_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9224..9985)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Clostridium butyricum RepID=B1QTN5_CLOBU
imidazole glycerol phosphate synthase subunit HisF
L2_047_000G1_scaffold_622_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9989..10708)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TN79_9CLOT
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
L2_047_000G1_scaffold_622_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10702..11316)
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hisH1; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9C2_9CLOT
L2_047_000G1_scaffold_622_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11325..11915)
DNA (591bp) protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hisB; imidazoleglycerol-phosphate dehydratase HisB (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=4 Tax=Clostridium butyricum RepID=B1QTN8_CLOBU
L2_047_000G1_scaffold_622_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11908..12963)
DNA (1056bp) protein (352aa)
hisC2; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9)
Histidinol-phosphate aminotransferase HisC {ECO:0000313|EMBL:AGX44099.1}; EC=2.6.1.9 {ECO:0000313|EMBL:AGX44099.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Histidinol-phosphate aminotransferase HisC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTI4_CLOSA
L2_047_000G1_scaffold_622_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12965..14251)
DNA (1287bp) protein (429aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Histidinol dehydrogenase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MBK7_9CLOT
L2_047_000G1_scaffold_622_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14285..14908)
DNA (624bp) protein (208aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TN74_9CLOT
L2_047_000G1_scaffold_622_19
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14899..16047)
DNA (1149bp) protein (383aa)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MUW4_9CLOT
hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000G1_scaffold_622_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16216..16719)
DNA (504bp) protein (168aa)
Putative Diamine acetyltransferase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1D6_9CLOT
Putative Diamine acetyltransferase 1 {ECO:0000313|EMBL:CDG02386.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
acetyltransferase domain protein
L2_047_000G1_scaffold_622_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16815..17972)
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:265 RepID=R6L0I9_9CLOT
L2_047_000G1_scaffold_622_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17960..19117)
DNA (1158bp) protein (386aa)
Aminotransferase, class V n=2 Tax=Clostridium RepID=A6LT12_CLOB8
class V aminotransferase
Aminotransferase, class V {ECO:0000313|EMBL:ABR33492.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_047_000G1_scaffold_622_23
unknown

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19282..19452
DNA (171bp) protein (57aa)

This feature has no annotations

L2_047_000G1_scaffold_622_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19528..19965)
DNA (438bp) protein (146aa)
UPF0735 ACT domain-containing protein CLL_A2896 n=2 Tax=Clostridium botulinum B RepID=Y2896_CLOBB
hypothetical protein
UPF0735 ACT domain-containing protein U728_1812 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_047_000G1_scaffold_622_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19965..20861)
DNA (897bp) protein (299aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
homoserine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002F55EFA
homoserine kinase
L2_047_000G1_scaffold_622_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20873..22327)
DNA (1455bp) protein (485aa)
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN23_CLOBU
Threonine synthase {ECO:0000313|EMBL:KHD16095.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_047_000G1_scaffold_622_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22582..23208)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TL60_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDH89630.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD21843.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_000G1_scaffold_622_28
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23372..23926)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01219.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NUDIX domain protein
L2_047_000G1_scaffold_622_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23929..24816)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Paenibacillus sp. A9 RepID=UPI000378009C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84334.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_622_30
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24890..26038)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27575.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
protein of unknown function DUF1648
Displaying items 1-30 of 49 in total

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