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L2_047_000G1_scaffold_673

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_673_1
unknown

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290..463
DNA (174bp) protein (58aa)

This feature has no annotations

L2_047_000G1_scaffold_673_2
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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520..1914
DNA (1395bp) protein (465aa)
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EFF63463.1}; EC=4.1.1.12 {ECO:0000313|EMBL:EFF63463.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
aspartate aminotransferase n=1 Tax=Bacillus sp. AP8 RepID=UPI0003050CB3
aspartate 4-decarboxylase
L2_047_000G1_scaffold_673_3
unknown

Not on your lists

comp(1998..2105)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_047_000G1_scaffold_673_4
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2318..3055)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T975_9CLOT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETT53986.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
L2_047_000G1_scaffold_673_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3034..4725)
DNA (1692bp) protein (564aa)
UPI0003D60E7E related cluster n=1 Tax=unknown RepID=UPI0003D60E7E
ABC transporter related protein {ECO:0000313|EMBL:ETI92504.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
cbiO5; cobalt ABC transport system ATP-binding protein CbiO5
L2_047_000G1_scaffold_673_6
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4665..5543)
DNA (879bp) protein (293aa)
Cobalt transport protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZP1_9CLOT
Transmembrane component CbrV {ECO:0000313|EMBL:GAF08831.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
cobalt transporter
L2_047_000G1_scaffold_673_7
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5565..6287)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LPP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB76067.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L2_047_000G1_scaffold_673_8
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6291..7829)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003657713
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHN21828.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
L2_047_000G1_scaffold_673_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8251..9636)
DNA (1386bp) protein (462aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
M18 family aminopeptidase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWW8_CLOBA
putative M18 family aminopeptidase 1
L2_047_000G1_scaffold_673_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9717..10628)
DNA (912bp) protein (304aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
HPr kinase/phosphorylase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=HPRK_CLOBA
hprK; HPr(Ser) kinase/phosphatase
L2_047_000G1_scaffold_673_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10642..10830)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035E17D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07653.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_673_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11056..11352
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26126.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_047_000G1_scaffold_673_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11831..12226)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LTA4_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72672.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_673_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12243..12485)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR25944.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_047_000G1_scaffold_673_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12635..13810)
DNA (1176bp) protein (392aa)
Putative Flavo-diiron protein FprA1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESJ8_9CLOT
Putative Flavo-diiron protein FprA1 {ECO:0000313|EMBL:CDG02195.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
metallo-beta-lactamase/flavodoxin
L2_047_000G1_scaffold_673_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13918..16200)
DNA (2283bp) protein (761aa)
helD1; helicase IV (EC:3.6.4.12)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Helicase IV n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MRH8_9CLOT
L2_047_000G1_scaffold_673_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16423..17019)
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium ultunense Esp RepID=M1ZEE5_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCQ96649.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
TetR family transcriptional regulator
L2_047_000G1_scaffold_673_18
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17129..17989
DNA (861bp) protein (287aa)
EDD domain protein, DegV family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C402_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:EEG73160.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
EDD domain protein, DegV family
L2_047_000G1_scaffold_673_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18112..18708)
DNA (597bp) protein (199aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPQ1_CLOBO
Putative membrane protein {ECO:0000313|EMBL:EES51034.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_047_000G1_scaffold_673_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19326..21758)
DNA (2433bp) protein (811aa)
homocysteine methyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002D9B431
B12 binding domain protein {ECO:0000313|EMBL:AIY80201.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
L2_047_000G1_scaffold_673_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21712..22401)
DNA (690bp) protein (230aa)
Methionine synthase activation domain {ECO:0000313|EMBL:KJZ84872.1}; EC=2.1.1.13 {ECO:0000313|EMBL:KJZ84872.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Vitamin B12 dependent methionine synthase, activation region n=2 Tax=Clostridium butyricum RepID=M8JMR5_CLOBU
vitamin B12 dependent methionine synthase, activation region
L2_047_000G1_scaffold_673_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22391..22846)
DNA (456bp) protein (152aa)
luxS; S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
S-ribosylhomocysteine lyase n=2 Tax=Clostridium botulinum B RepID=B2TP85_CLOBB
L2_047_000G1_scaffold_673_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22860..23747)
DNA (888bp) protein (296aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Methylenetetrahydrofolate reductase n=2 Tax=Clostridium botulinum B RepID=B2TP86_CLOBB
L2_047_000G1_scaffold_673_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24194..24922)
DNA (729bp) protein (243aa)
ssuB2; aliphatic sulfonates import ATP-binding protein SsuB (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H864_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98700.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_047_000G1_scaffold_673_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24903..25907)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98701.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic component
L2_047_000G1_scaffold_673_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25909..26685)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98702.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter permease protein
L2_047_000G1_scaffold_673_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26955..27713)
DNA (759bp) protein (253aa)
TatD family hydrolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H866_9CLOT
TatD family hydrolase {ECO:0000313|EMBL:EEH98705.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ycfH; hydrolase of PHP superfamily
L2_047_000G1_scaffold_673_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27828..28802)
DNA (975bp) protein (325aa)
UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF19_9CLOT
UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase {ECO:0000313|EMBL:EOR27640.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
tagO; UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase
L2_047_000G1_scaffold_673_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29005..29646)
DNA (642bp) protein (214aa)
V-type ATP synthase subunit D n=1 Tax=Clostridium colicanis 209318 RepID=N9WKE0_9CLOT
ntpD; V-type sodium ATPase subunit D
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_673_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29650..31029)
DNA (1380bp) protein (460aa)
V-type ATP synthase beta chain n=4 Tax=Clostridium botulinum RepID=VATB_CLOBA
V-type ATP synthase subunit B
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying items 1-30 of 42 in total

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