ggKbase home page

L2_047_000G1_scaffold_721

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_721_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..174
DNA (174bp) protein (58aa)
Transketolase, pyridine binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ2_9CLOT
hypothetical protein
Transketolase, pyridine binding domain protein {ECO:0000313|EMBL:EKY27766.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_047_000G1_scaffold_721_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

289..1143
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y778_9CLOT
transporter
Transporter {ECO:0000313|EMBL:CDM68236.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000G1_scaffold_721_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1307..1993
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=2 Tax=Clostridium botulinum E RepID=B2UZZ4_CLOBA
ftsE; cell division ATP-binding protein FtsE
ABC transporter {ECO:0000313|EMBL:KIL08141.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_721_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1983..2873
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAN8_9CLOT
ftsX-like permease family protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_721_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2943..4172
DNA (1230bp) protein (410aa)
Carboxyl-terminal protease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C771_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83016.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_721_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4187..5479
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99526.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_721_7

Not on your lists

5713..7674
DNA (1962bp) protein (654aa)
UvrABC system protein B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWS6_CLOSA
UvrABC system protein B {ECO:0000313|EMBL:ETJ16602.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
uvrB; UvrABC system protein B
L2_047_000G1_scaffold_721_8
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7701..9068
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XBK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL19686.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
KWG repeat-containing protein
L2_047_000G1_scaffold_721_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9275..12097
DNA (2823bp) protein (941aa)
UvrABC system protein A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIG7_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
uvrA; UvrABC system protein A
L2_047_000G1_scaffold_721_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12194..12634
DNA (441bp) protein (147aa)
FHA-domain containing secreted protein n=2 Tax=Clostridium botulinum E RepID=B2UZY8_CLOBA
FHA-domain containing protein
Signal peptide protein {ECO:0000313|EMBL:KIL08135.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_721_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12658..13881
DNA (1224bp) protein (408aa)
Putative FtsW-like protein RodA n=1 Tax=Clostridium intestinale URNW RepID=U2N0S6_9CLOT
Cell division protein FtsW {ECO:0000313|EMBL:KJU72294.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cell cycle family protein
L2_047_000G1_scaffold_721_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13884..15356
DNA (1473bp) protein (491aa)
Penicillin-binding protein transpeptidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAN1_9CLOT
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:EHJ02290.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
penicillin-binding protein
L2_047_000G1_scaffold_721_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15537..17408
DNA (1872bp) protein (624aa)
UvrABC system protein C n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWS2_CLOSA
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
uvrC; excinuclease ABC subunit C
L2_047_000G1_scaffold_721_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17532..18449
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJ15_9CLOT
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L2_047_000G1_scaffold_721_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18645..18968
DNA (324bp) protein (108aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY83006.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_721_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19369..20247
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH27_9CLOT
P-loop ATPase family protein
Nucleotide-binding protein U729_767 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_721_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20244..21593
DNA (1350bp) protein (450aa)
Putative gluconeogenesis factor n=2 Tax=Clostridium butyricum RepID=B1QWJ8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD15491.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_047_000G1_scaffold_721_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21703..22650
DNA (948bp) protein (316aa)
Sporulation protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FY45_CLOPA
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_047_000G1_scaffold_721_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22666..26244
DNA (3579bp) protein (1193aa)
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DNA polymerase III, alpha subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIJ6_9CLOT
L2_047_000G1_scaffold_721_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26655..27614
DNA (960bp) protein (320aa)
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
6-phosphofructokinase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKN8_9CLOT
L2_047_000G1_scaffold_721_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27680..29098
DNA (1419bp) protein (473aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AIY83287.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AIY83287.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Pyruvate kinase n=1 Tax=Clostridium intestinale URNW RepID=U2PZD1_9CLOT
L2_047_000G1_scaffold_721_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30013..30375
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZX6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08126.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_721_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30442..31812
DNA (1371bp) protein (457aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002E83447
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AIY81652.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_047_000G1_scaffold_721_24
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32036..32956
DNA (921bp) protein (307aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XUS0_DESHA
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EHL04642.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
hypothetical protein
L2_047_000G1_scaffold_721_25
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32899..33165
DNA (267bp) protein (89aa)
Alcohol dehydrogenase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R3B3_9CLOT
theronine dehydrogenase-like Zn-dependent dehydrogenase
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:AEY67122.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L2_047_000G1_scaffold_721_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33618..33956
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW02957.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L2_047_000G1_scaffold_721_27
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33980..35257
DNA (1278bp) protein (426aa)
PTS system protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG54_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
PTS system transporter subunit IIC
L2_047_000G1_scaffold_721_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

35335..36792
DNA (1458bp) protein (486aa)
Glycosyl hydrolase, family 1 n=2 Tax=Erysipelotrichaceae RepID=B0N1Q9_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS19683.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycosyl hydrolase family protein
L2_047_000G1_scaffold_721_29
unknown

Not on your lists

comp(37254..37580)
DNA (327bp) protein (109aa)

This feature has no annotations

L2_047_000G1_scaffold_721_30
unknown

Not on your lists

comp(37725..38024)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

View Taxonomy