ggKbase home page

L2_047_000G1_scaffold_859

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_859_1
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..263
DNA (261bp) protein (87aa)
GTPase HflX n=3 Tax=unclassified Peptostreptococcaceae RepID=B0A927_9FIRM
GTP-binding protein HflX {ECO:0000313|EMBL:EEA84269.1}; Flags: Fragment;; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
hypothetical protein
L2_047_000G1_scaffold_859_2
unknown

Not on your lists

734..1123
DNA (390bp) protein (130aa)

This feature has no annotations

L2_047_000G1_scaffold_859_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1152..1823
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8N6L7_BACCE
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KEI95178.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
hypothetical protein
L2_047_000G1_scaffold_859_4
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1980..2999)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4I792_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KEI15177.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
phage-associated protein
L2_047_000G1_scaffold_859_5
unknown

Not on your lists

comp(3085..3594)
DNA (510bp) protein (170aa)

This feature has no annotations

L2_047_000G1_scaffold_859_6
unknown

Not on your lists

comp(3788..4069)
DNA (282bp) protein (94aa)

This feature has no annotations

L2_047_000G1_scaffold_859_7
unknown

Not on your lists

comp(4060..4479)
DNA (420bp) protein (140aa)

This feature has no annotations

L2_047_000G1_scaffold_859_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4741..5367
DNA (627bp) protein (209aa)
DNA replication and repair protein RadC n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S278_THEOJ
UPF0758 protein
UPF0758 protein {ECO:0000313|EMBL:CDM68672.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000G1_scaffold_859_9
unknown

Not on your lists

5399..5782
DNA (384bp) protein (128aa)

This feature has no annotations

L2_047_000G1_scaffold_859_10
unknown

Not on your lists

5799..6281
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248D205
L2_047_000G1_scaffold_859_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6388..8592
DNA (2205bp) protein (735aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037F370F
phosphoadenosine phosphosulfate reductase family protein
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:ACA47076.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
L2_047_000G1_scaffold_859_12
unknown

Not on your lists

8829..9113
DNA (285bp) protein (95aa)

This feature has no annotations

L2_047_000G1_scaffold_859_13
unknown

Not on your lists

9115..10182
DNA (1068bp) protein (356aa)

This feature has no annotations

L2_047_000G1_scaffold_859_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10184..10855
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003704BDF
Uncharacterized protein {ECO:0000313|EMBL:KJU71557.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_047_000G1_scaffold_859_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10905..11348
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037BABCE
Uncharacterized protein {ECO:0000313|EMBL:EQF26881.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L2_047_000G1_scaffold_859_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11364..12056
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000366FD45
ThiF family protein {ECO:0000313|EMBL:EQF26860.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
UBA/THIF-type NAD/FAD binding protein
L2_047_000G1_scaffold_859_17
unknown

Not on your lists

12077..12382
DNA (306bp) protein (102aa)

This feature has no annotations

L2_047_000G1_scaffold_859_18
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12570..12977
DNA (408bp) protein (136aa)
Single-stranded DNA-binding protein id=4021627 bin=GWB1_CP_36_13 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
single-strand DNA-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
L2_047_000G1_scaffold_859_19
unknown

Not on your lists

13120..13611
DNA (492bp) protein (164aa)

This feature has no annotations

L2_047_000G1_scaffold_859_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13888..16320
DNA (2433bp) protein (811aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1407017 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B str. Osaka05.;"
DNA topoisomerase (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RP80_9CLOT
L2_047_000G1_scaffold_859_21
unknown

Not on your lists

16337..16546
DNA (210bp) protein (70aa)

This feature has no annotations

L2_047_000G1_scaffold_859_22
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16881..17651
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI00037A5538
Uncharacterized protein {ECO:0000313|EMBL:CDL90731.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
L2_047_000G1_scaffold_859_23
unknown

Not on your lists

17673..18110
DNA (438bp) protein (146aa)

This feature has no annotations

L2_047_000G1_scaffold_859_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18430..18699
DNA (270bp) protein (90aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSU8_9CLOT
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:EKQ50301.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
AbrB family transcriptional regulator
L2_047_000G1_scaffold_859_25
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18973..19842
DNA (870bp) protein (290aa)
Putative integrase/recombinase, putative n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AAZ8_CLOBO
Integrase/recombinase {ECO:0000313|EMBL:KDR96797.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
putative integrase/recombinase
L2_047_000G1_scaffold_859_26
unknown

Not on your lists

19845..20093
DNA (249bp) protein (83aa)

This feature has no annotations

L2_047_000G1_scaffold_859_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20267..20818
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum Af84 RepID=S8BHT3_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:BAP25567.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_047_000G1_scaffold_859_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20984..21484)
DNA (501bp) protein (167aa)
Lincosamide nucleotidyltransferase n=2 Tax=Clostridium RepID=C9WIW3_CLOPF
Lincosamide nucleotidyltransferase {ECO:0000313|EMBL:CDA10498.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
aminoglycoside nucleotidyltransferase, putative
L2_047_000G1_scaffold_859_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21640..22686)
DNA (1047bp) protein (349aa)
Transposase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y1H7_9CLOT
Transposase {ECO:0000313|EMBL:CDA10497.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transposase
L2_047_000G1_scaffold_859_30
unknown

Not on your lists

22877..23071
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

View Taxonomy