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L2_047_000G1_scaffold_2226

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_2226_1
unknown

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570..674
DNA (105bp) protein (35aa)

This feature has no annotations

L2_047_000G1_scaffold_2226_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1043..2275
DNA (1233bp) protein (411aa)
Putative SagA protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EHM5_9CLOT
Putative SagA protein {ECO:0000313|EMBL:CDG00697.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
SagA protein
L2_047_000G1_scaffold_2226_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2431..3186
DNA (756bp) protein (252aa)
Methyltransferase small n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9L9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD15459.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
small; methyltransferase Small
L2_047_000G1_scaffold_2226_4
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3186..4031
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
YraL family putative S-adenosylmethionine-dependent methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH17_9CLOT
S-adenosylmethionine-dependent methyltransferase, YraL family
L2_047_000G1_scaffold_2226_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4100..4345)
DNA (246bp) protein (82aa)
Transcriptional regulator, AbrB family n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAQ9_9CLOT
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EHJ02318.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
abrB; AbrB family transcriptional regulator
L2_047_000G1_scaffold_2226_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4833..5423
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00693.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_047_000G1_scaffold_2226_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5498..7786
DNA (2289bp) protein (763aa)
Dead_2 n=2 Tax=Clostridium butyricum RepID=B1QWM8_CLOBU
ATP-dependent helicase {ECO:0000313|EMBL:KJU72318.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DEAD_2 family protein
L2_047_000G1_scaffold_2226_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7815..8687)
DNA (873bp) protein (291aa)
galactose mutarotase n=1 Tax=Clostridium beijerinckii RepID=UPI0002DDD39D
Galactose mutarotase {ECO:0000313|EMBL:KJU72317.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aldose 1-epimerase family protein
L2_047_000G1_scaffold_2226_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8956..9834
DNA (879bp) protein (293aa)
YihY family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V006_CLOBA
Ribonuclease BN {ECO:0000313|EMBL:KJU72316.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
yihY; YihY family inner membrane domain protein
L2_047_000G1_scaffold_2226_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9989..10348
DNA (360bp) protein (120aa)
Single-stranded DNA-binding protein n=2 Tax=environmental samples RepID=R6FRM9_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
ssb; single-stranded DNA-binding family protein
L2_047_000G1_scaffold_2226_11
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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10729..11055
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CUX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94334.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_047_000G1_scaffold_2226_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11086..11463
DNA (378bp) protein (126aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWJ1_CLOBO
acpS; 4'-phosphopantetheinyl transferase
L2_047_000G1_scaffold_2226_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11467..12969
DNA (1503bp) protein (501aa)
YjeF domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ7_9CLOT
yjeF-related family protein
YjeF-related family protein {ECO:0000313|EMBL:AIY83556.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_2226_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13028..13657
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99516.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_047_000G1_scaffold_2226_15
unknown

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13781..14035
DNA (255bp) protein (85aa)

This feature has no annotations

L2_047_000G1_scaffold_2226_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14020..14373
DNA (354bp) protein (118aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
endoribonuclease endoA (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIJ0_9CLOT
L2_047_000G1_scaffold_2226_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14626..14724
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y604_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ03624.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Displaying 17 items

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