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L2_047_000G1_scaffold_2406

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_2406_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1188
DNA (1188bp) protein (396aa)
Response regulator receiver protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1R0_CLOB8
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIY83751.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_2406_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1198..2982
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Putative signal transduction protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U731_9CLOT
HAMP domain protein
L2_047_000G1_scaffold_2406_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2942..3934
DNA (993bp) protein (331aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MUQ8_9CLOT
periplasmic binding s and sugar binding domain of LacI family protein
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:AIY83606.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_047_000G1_scaffold_2406_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3962..5005
DNA (1044bp) protein (348aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G5P7_CLOPA
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU72345.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
periplasmic binding domain protein
L2_047_000G1_scaffold_2406_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5049..5381)
DNA (333bp) protein (111aa)
HesB-like selenoprotein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZ93_9CLOT
HesB-like selenofamily protein
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:KJU72056.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_2406_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5591..6346
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14171.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ribosomal RNA adenine dimethylase family protein
L2_047_000G1_scaffold_2406_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6444..8891)
DNA (2448bp) protein (816aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AIY84261.1}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AIY84261.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYS1_9CLOT
L2_047_000G1_scaffold_2406_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9197..10093)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97320.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
traB family protein
L2_047_000G1_scaffold_2406_9
unknown

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comp(10161..10910)
DNA (750bp) protein (250aa)

This feature has no annotations

L2_047_000G1_scaffold_2406_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11445..11807
DNA (363bp) protein (121aa)
Putative Integral membrane protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXT4_9CLOT
Putative Integral membrane protein {ECO:0000313|EMBL:CDG01056.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_047_000G1_scaffold_2406_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11857..13185)
DNA (1329bp) protein (443aa)
Amino acid permease-associated region n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPQ0_CELLD
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADZ83710.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_047_000G1_scaffold_2406_12
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13454..13531
DNA (78bp) protein (26aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WC36_9FIRM
rubredoxin/rubrerythrin
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:AHM58263.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
Displaying 12 items

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