ggKbase home page

L2_047_000G1_scaffold_2473

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_2473_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1332)
DNA (1332bp) protein (444aa)
alpha-L-arabinofuranosidase (EC:3.2.1.55)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3ATH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26538.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_047_000G1_scaffold_2473_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1482..2411)
DNA (930bp) protein (310aa)
pfkB; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Tagatose-6-phosphate kinase LacC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZG5_CLOSA
L2_047_000G1_scaffold_2473_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2430..3284)
DNA (855bp) protein (285aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.-)
Tagatose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:CDH92032.1}; EC=4.1.2.- {ECO:0000313|EMBL:CDH92032.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
fructose-bisphosphate aldolase n=1 Tax=Clostridium botulinum RepID=UPI0002D5B856
L2_047_000G1_scaffold_2473_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3302..3817)
DNA (516bp) protein (172aa)
lacB; galactose-6-phosphate isomerase subunit lacB (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit lacB {ECO:0000313|EMBL:AIY84639.1}; EC=5.3.1.26 {ECO:0000313|EMBL:AIY84639.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Galactose-6-phosphate isomerase subunit lacB n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QHC3_9BACI
L2_047_000G1_scaffold_2473_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3830..4258)
DNA (429bp) protein (143aa)
lacA; isomerase/acetyltransferase (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=2 Tax=Clostridium butyricum RepID=B1R026_CLOBU
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KJU72899.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_047_000G1_scaffold_2473_6
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4274..5752)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002D6E81D
Uncharacterized protein {ECO:0000313|EMBL:EOH74407.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
sulfatase
L2_047_000G1_scaffold_2473_7
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5884..6696)
DNA (813bp) protein (271aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2NTS0_9ENTE
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EOH74408.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_047_000G1_scaffold_2473_8
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6696..7499)
DNA (804bp) protein (268aa)
Phosphotransferase system PTS sorbose-specific IIC subunit n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK36_SEBTE
PTS sorbose-specific transporter subunit IIC
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:ACZ08952.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_047_000G1_scaffold_2473_9
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(7534..8004)
DNA (471bp) protein (157aa)
PTS system sorbose subfamily IIB component n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK35_SEBTE
PTS system sorbose subfamily transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:ACZ08951.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_047_000G1_scaffold_2473_10
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(8027..8458)
DNA (432bp) protein (144aa)
PTS system fructose subfamily IIA component n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK34_SEBTE
PTS system fructose subfamily transporter subunit IIA
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:ACZ08950.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_047_000G1_scaffold_2473_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8733..9512
DNA (780bp) protein (260aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CWM0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16771.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_047_000G1_scaffold_2473_12
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9529..10656
DNA (1128bp) protein (376aa)
Anaerobic sulfatase-maturating enzyme {ECO:0000313|EMBL:CDI40804.1}; EC=1.8.98.- {ECO:0000313|EMBL:CDI40804.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Anaerobic sulfatase-maturating enzyme n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWQ1_TEPAE
radical SAM protein
L2_047_000G1_scaffold_2473_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10662..13091
DNA (2430bp) protein (810aa)
levR3; transcriptional regulatory protein LevR (EC:2.7.1.-)
PTS system transcriptional activator n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDC9_9CLOT
PTS system transcriptional activator {ECO:0000313|EMBL:EHI99227.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Displaying 13 items

View Taxonomy