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L2_047_000G1_scaffold_2626

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_2626_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(382..1845)
DNA (1464bp) protein (488aa)
UPI0002FE6DAA related cluster n=1 Tax=unknown RepID=UPI0002FE6DAA
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEG53765.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
beta-glucosidase
L2_047_000G1_scaffold_2626_2
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1845..3137)
DNA (1293bp) protein (431aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IMF6_THETR
PTS system, lactose/cellobiose family IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
L2_047_000G1_scaffold_2626_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3276..3668
DNA (393bp) protein (131aa)
UPI0003065413 related cluster n=1 Tax=unknown RepID=UPI0003065413
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG53768.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
chemotaxis protein CheY
L2_047_000G1_scaffold_2626_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3876..4262
DNA (387bp) protein (129aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4H9_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG53768.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_047_000G1_scaffold_2626_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4339..4656
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V3J9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07379.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_047_000G1_scaffold_2626_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4794..4970)
DNA (177bp) protein (59aa)
GNAT family Acetyltransferase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GU52_CLOSY
GNAT family Acetyltransferase {ECO:0000313|EMBL:EGA91704.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_2626_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(5179..5433)
DNA (255bp) protein (85aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6P0_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC42347.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_047_000G1_scaffold_2626_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5420..5824)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
ArsC {ECO:0000313|EMBL:ETI87900.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
protein-tyrosine phosphatase
L2_047_000G1_scaffold_2626_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5821..6195)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52348.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_047_000G1_scaffold_2626_10
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6266..6712)
DNA (447bp) protein (149aa)
Membrane protein n=1 Tax=Clostridium intestinale URNW RepID=U2PR56_9CLOT
Membrane protein {ECO:0000313|EMBL:ERK28920.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
membrane protein
L2_047_000G1_scaffold_2626_11
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6714..7001)
DNA (288bp) protein (96aa)
Transcriptional regulator n=3 Tax=Clostridium acetobutylicum RepID=F0K8Y3_CLOAE
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:AAK81256.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_047_000G1_scaffold_2626_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7080..7658)
DNA (579bp) protein (193aa)
DNA-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2N3T2_9CLOT
DNA-binding protein {ECO:0000313|EMBL:CEN71961.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DNA-binding protein
L2_047_000G1_scaffold_2626_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7966..8286)
DNA (321bp) protein (107aa)
[2Fe-2S]-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCR7_9CLOT
[2Fe-2S]-binding domain protein {ECO:0000313|EMBL:EKY25756.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
BFD (2Fe-2S)-binding domain-containing protein
L2_047_000G1_scaffold_2626_14
unknown

Not on your lists

comp(8403..8603)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_047_000G1_scaffold_2626_15
unknown

Not on your lists

comp(8622..8744)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_047_000G1_scaffold_2626_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8867..9748)
DNA (882bp) protein (294aa)
Pirin family protein n=2 Tax=Clostridium perfringens RepID=H7CTP3_CLOPF
pirin
Pirin-like protein {ECO:0000313|EMBL:BAB80496.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_047_000G1_scaffold_2626_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9843..10277)
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3L2_CLOPF
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT71651.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
MarR family transcriptional regulator
L2_047_000G1_scaffold_2626_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10700..11920)
DNA (1221bp) protein (407aa)
50S ribosome-binding GTPase family protein n=29 Tax=Clostridium difficile RepID=T2UM88_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEH97846.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GTP-binding protein
Displaying 18 items

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