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L2_047_000G1_scaffold_1608

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_1608_1
unknown

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707..1276
DNA (570bp) protein (190aa)

This feature has no annotations

L2_047_000G1_scaffold_1608_2
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1137..2087)
DNA (951bp) protein (317aa)
Protein RarD n=1 Tax=Actinomyces sp. ICM39 RepID=J3J596_9ACTO
Protein RarD {ECO:0000313|EMBL:EJN46236.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
RarD protein, DMT superfamily transporter
L2_047_000G1_scaffold_1608_3
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2084..3406)
DNA (1323bp) protein (441aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Glutamyl-tRNA reductase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC49_9ACTO
glutamyl-tRNAGlu reductase, N-terminal domain protein
L2_047_000G1_scaffold_1608_4
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3648..4745
DNA (1098bp) protein (366aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV3_9ACTO
L2_047_000G1_scaffold_1608_5
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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4742..6208
DNA (1467bp) protein (489aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Putative protoporphyrinogen oxidase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV4_9ACTO
Putative protoporphyrinogen oxidase {ECO:0000313|EMBL:EDN80328.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L2_047_000G1_scaffold_1608_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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6205..7239
DNA (1035bp) protein (345aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Hydroxymethylbilane synthase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV5_9ACTO
L2_047_000G1_scaffold_1608_7
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7236..8057
DNA (822bp) protein (274aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EDN80330.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EDN80330.1};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Uroporphyrinogen-III synthase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV6_9ACTO
uroporphyrinogen III synthase HEM4
L2_047_000G1_scaffold_1608_8
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8054..9085
DNA (1032bp) protein (344aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U230_9ACTO
delta-aminolevulinic acid dehydratase
L2_047_000G1_scaffold_1608_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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9133..10518
DNA (1386bp) protein (462aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9L8_9ACTO
L2_047_000G1_scaffold_1608_10
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(10654..11136)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J2YSS5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN51023.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
L2_047_000G1_scaffold_1608_11
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11165..11647)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1R421_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH28741.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
L2_047_000G1_scaffold_1608_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12343..12561)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U222_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC97174.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_1608_13
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12896..13105)
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=3 Tax=Actinomyces RepID=A7BAW6_9ACTO
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EWC97178.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
cold shock-like protein
L2_047_000G1_scaffold_1608_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13305..14105)
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U220_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFF78799.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
phosphonate-transporting ATPase
L2_047_000G1_scaffold_1608_15
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14102..15130)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZFD1_9ACTO
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EWC97179.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter permease
L2_047_000G1_scaffold_1608_16
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15219..16355)
DNA (1137bp) protein (379aa)
Periplasmic binding protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U216_9ACTO
Periplasmic binding protein {ECO:0000313|EMBL:EFF78821.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
ABC transporter periplasmic protein
L2_047_000G1_scaffold_1608_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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16565..17497
DNA (933bp) protein (311aa)
5'-nucleotidase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EH28_9ACTO
5'-nucleotidase {ECO:0000313|EMBL:EWC97173.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
putative 5'-nucleotidase
L2_047_000G1_scaffold_1608_18
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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17596..19722
DNA (2127bp) protein (709aa)
Membrane protein, PF09991 family n=1 Tax=Actinomyces sp. ICM39 RepID=J2YRL0_9ACTO
Membrane protein, PF09991 family {ECO:0000313|EMBL:EWC97167.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter-like protein
L2_047_000G1_scaffold_1608_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19719..20594
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9Z7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73094.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
ABC-type cobalt transport system, permease component CbiQ-related transporter
Displaying 19 items

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