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L2_047_000G1_scaffold_736

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_736_1
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..581)
DNA (579bp) protein (193aa)
ABC transporter, permease protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EGD2_9ACTO
ABC transporter, permease protein {ECO:0000313|EMBL:EWC95779.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter permease
L2_047_000G1_scaffold_736_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(878..1540)
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EGF0_9ACTO
ribulose-phosphate 3-epimerase
L2_047_000G1_scaffold_736_3
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1551..3023)
DNA (1473bp) protein (491aa)
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Actinomyces sp. ICM39 RepID=J3J536_9ACTO
Putative ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:EJN46056.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Fmu (Sun) domain-containing protein
L2_047_000G1_scaffold_736_4
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3020..3838)
DNA (819bp) protein (273aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Methionyl-tRNA formyltransferase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J523_9ACTO
methionyl-tRNA formyltransferase
L2_047_000G1_scaffold_736_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3999..5981)
DNA (1983bp) protein (661aa)
Primosomal protein N' family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J540_9ACTO
Primosomal protein N' family protein {ECO:0000313|EMBL:EWC95776.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
primosome assembly protein PriA
L2_047_000G1_scaffold_736_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6024..6659)
DNA (636bp) protein (212aa)
Vitamin K epoxide reductase family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQI8_9ACTO
Vitamin K epoxide reductase family protein {ECO:0000313|EMBL:EWC95638.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
vitamin K epoxide reductase
L2_047_000G1_scaffold_736_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6656..7843)
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EGC4_9ACTO
L2_047_000G1_scaffold_736_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7840..9069)
DNA (1230bp) protein (410aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EWC95662.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EWC95662.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EWC95662.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EGD9_9ACTO
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
L2_047_000G1_scaffold_736_9
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9071..9337)
DNA (267bp) protein (89aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
DNA-directed RNA polymerase subunit omega n=7 Tax=Actinobacteria RepID=A7BCB5_9ACTO
DNA-directed RNA polymerase subunit omega
L2_047_000G1_scaffold_736_10
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9374..9931)
DNA (558bp) protein (186aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCB4_9ACTO
L2_047_000G1_scaffold_736_11
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9959..10270)
DNA (312bp) protein (104aa)
Uncharacterized protein n=7 Tax=Actinobacteria RepID=A7BCB3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJN52666.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
hypothetical protein
L2_047_000G1_scaffold_736_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10372..11238)
DNA (867bp) protein (289aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZBS3_9ACTO
L2_047_000G1_scaffold_736_13
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11235..14534)
DNA (3300bp) protein (1100aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U1G8_9ACTO
carbamoyl-phosphate synthase large subunit
L2_047_000G1_scaffold_736_14
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14534..15721)
DNA (1188bp) protein (396aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Actinomyces sp. ICM39 RepID=J3J525_9ACTO
carbamoyl-phosphate synthase, small subunit
L2_047_000G1_scaffold_736_15
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15718..17037)
DNA (1320bp) protein (440aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Dihydroorotase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J546_9ACTO
dihydroorotase, multifunctional complex type
L2_047_000G1_scaffold_736_16
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17030..18016)
DNA (987bp) protein (329aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQJ2_9ACTO
L2_047_000G1_scaffold_736_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18020..18583)
DNA (564bp) protein (188aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCA7_9ACTO
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_736_18
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18941..19237
DNA (297bp) protein (99aa)
PF10006 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J527_9ACTO
PF10006 family protein {ECO:0000313|EMBL:EJN46031.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L2_047_000G1_scaffold_736_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19311..19931)
DNA (621bp) protein (207aa)
N utilization substance protein B homolog n=1 Tax=Actinomyces sp. ICM39 RepID=J3J545_9ACTO
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
nusB; transcription antitermination factor
L2_047_000G1_scaffold_736_20
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19931..20494)
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQH9_9ACTO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
elongation factor P
L2_047_000G1_scaffold_736_21
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20519..21043)
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000313|EMBL:EDN80819.1}; EC=2.7.1.71 {ECO:0000313|EMBL:EDN80819.1};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC95_9ACTO
L2_047_000G1_scaffold_736_22
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21040..22122)
DNA (1083bp) protein (361aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J583_9ACTO
L2_047_000G1_scaffold_736_23
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22119..22628)
DNA (510bp) protein (170aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQG2_9ACTO
L2_047_000G1_scaffold_736_24
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22625..23824)
DNA (1200bp) protein (400aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Chorismate synthase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC92_9ACTO
chorismate synthase
L2_047_000G1_scaffold_736_25
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23897..24937)
DNA (1041bp) protein (347aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC91_9ACTO
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
FKBP-type peptidylprolyl isomerase
L2_047_000G1_scaffold_736_26
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24934..26319)
DNA (1386bp) protein (462aa)
Proteasome accessory factor PafA n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZBS0_9ACTO
Putative Pup--protein ligase {ECO:0000313|EMBL:EWC95666.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Pup--protein ligase
L2_047_000G1_scaffold_736_27
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26321..26497)
DNA (177bp) protein (59aa)
Ubiquitin-like protein Pup n=2 Tax=Actinomyces odontolyticus RepID=A7BC89_9ACTO
Ubiquitin-like protein Pup {ECO:0000313|EMBL:EDN80813.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Prokaryotic ubiquitin-like protein Pup
L2_047_000G1_scaffold_736_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26523..28043)
DNA (1521bp) protein (507aa)
Proteasome accessory factor PafA2 {ECO:0000313|EMBL:EWC95694.1}; EC=6.3.2.- {ECO:0000313|EMBL:EWC95694.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Proteasome accessory factor PafA2 n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC88_9ACTO
peptidase
L2_047_000G1_scaffold_736_29
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28040..29584)
DNA (1545bp) protein (515aa)
proteasome ATPase (EC:3.6.4.6)
AAA ATPase forming ring-shaped complexes n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U1J3_9ACTO
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_736_30
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29577..30602)
DNA (1026bp) protein (342aa)
tRNA methyltransferase complex GCD14 subunit n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC86_9ACTO
tRNA methyltransferase complex GCD14 subunit {ECO:0000313|EMBL:EWC95702.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
tRNA (adenine-58-N(1)-) methyltransferase
Displaying items 1-30 of 41 in total

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