ggKbase home page

L2_047_000G1_scaffold_780

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_780_1
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105..857
DNA (753bp) protein (251aa)
polyphosphate glucokinase (EC:2.7.1.63)
ROK family protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY92_9ACTO
Putative polyphosphate--glucose phosphotransferase {ECO:0000313|EMBL:EWC96239.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_780_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1327..2139
DNA (813bp) protein (271aa)
PF03883 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5C8_9ACTO
PF03883 family protein {ECO:0000313|EMBL:EWC96269.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L2_047_000G1_scaffold_780_3
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2219..3556
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY90_9ACTO
Alpha-L-fucosidase {ECO:0000313|EMBL:EJN46249.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
alpha-L-fucosidase
L2_047_000G1_scaffold_780_4
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3560..4303)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5C1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJN46296.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L2_047_000G1_scaffold_780_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4300..5214)
DNA (915bp) protein (305aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5H6_9ACTO
hypothetical protein
L2_047_000G1_scaffold_780_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5275..5952
DNA (678bp) protein (226aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
lipB; lipoyltransferase (EC:2.3.1.-)
Octanoyltransferase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5A9_9ACTO
L2_047_000G1_scaffold_780_7
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5949..7013
DNA (1065bp) protein (355aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY86_9ACTO
L2_047_000G1_scaffold_780_8
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7010..8494
DNA (1485bp) protein (495aa)
AMP-binding enzyme n=1 Tax=Actinomyces sp. ICM39 RepID=J2YR58_9ACTO
AMP-binding enzyme {ECO:0000313|EMBL:EJN46297.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
putative o-succinylbenzoate--CoA ligase
L2_047_000G1_scaffold_780_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8583..9950
DNA (1368bp) protein (456aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YR73_9ACTO
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EWC96273.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
NADH dehydrogenase
L2_047_000G1_scaffold_780_10
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10198..10599)
DNA (402bp) protein (134aa)
PF11253 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YR31_9ACTO
PF11253 family protein {ECO:0000313|EMBL:EJN46267.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L2_047_000G1_scaffold_780_11
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10923..13670
DNA (2748bp) protein (916aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Actinomyces sp. ICM39 RepID=J3EGR6_9ACTO
L2_047_000G1_scaffold_780_12
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13821..14390
DNA (570bp) protein (190aa)
Flavin reductase-like protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5I1_9ACTO
Flavin reductase-like protein {ECO:0000313|EMBL:EJN46288.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
cytosolic protein
L2_047_000G1_scaffold_780_13
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14466..15878)
DNA (1413bp) protein (471aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YR16_9ACTO
L2_047_000G1_scaffold_780_14
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16014..16385)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZCC3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC96264.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_780_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16385..16888)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Actinomyces odontolyticus RepID=A7BDC3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF80220.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L2_047_000G1_scaffold_780_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17059..17550)
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Peptide deformylase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8E2_9ACTO
peptide deformylase
L2_047_000G1_scaffold_780_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17552..19360)
DNA (1809bp) protein (603aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5I9_9ACTO
L2_047_000G1_scaffold_780_18
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19441..19857)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY73_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC96226.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_780_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19965..20468)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YR53_9ACTO
Putative lipoprotein {ECO:0000313|EMBL:EWC96241.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_780_20
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20489..21694)
DNA (1206bp) protein (402aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5B1_9ACTO
isoprenoid biosynthesis protein
L2_047_000G1_scaffold_780_21
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21774..23015)
DNA (1242bp) protein (414aa)
Peptidase, M50 family {ECO:0000313|EMBL:EWC96252.1}; EC=3.4.24.- {ECO:0000313|EMBL:EWC96252.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Putative RIP metalloprotease RseP n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY70_9ACTO
peptidase M50
L2_047_000G1_scaffold_780_22
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23018..24289)
DNA (1272bp) protein (424aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY69_9ACTO
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_047_000G1_scaffold_780_23
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24289..24837)
DNA (549bp) protein (183aa)
DivIVA domain repeat protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDD1_9ACTO
DivIVA domain repeat protein {ECO:0000313|EMBL:EWC96234.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L2_047_000G1_scaffold_780_24
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24834..25238)
DNA (405bp) protein (135aa)
DivIVA domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC61_9ACTO
DivIVA domain protein {ECO:0000313|EMBL:EWC96237.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_047_000G1_scaffold_780_25
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25235..26515)
DNA (1281bp) protein (427aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY66_9ACTO
radical SAM enzyme, Cfr family
L2_047_000G1_scaffold_780_26
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26512..27423)
DNA (912bp) protein (304aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Phosphatidate cytidylyltransferase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDD4_9ACTO
phosphatidate cytidylyltransferase
L2_047_000G1_scaffold_780_27
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27423..27980)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY64_9ACTO
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
ribosome recycling factor
L2_047_000G1_scaffold_780_28
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28019..28729)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Uridylate kinase n=2 Tax=Actinomyces RepID=D4TY63_9ACTO
uridylate kinase
L2_047_000G1_scaffold_780_29
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28860..29687)
DNA (828bp) protein (276aa)
Elongation factor Ts n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1RHM0_9ACTO
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
translation elongation factor Ts
L2_047_000G1_scaffold_780_30
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29713..30543)
DNA (831bp) protein (277aa)
30S ribosomal protein S2 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY61_9ACTO
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
rpsB; 30S ribosomal protein S2
Displaying items 1-30 of 41 in total

View Taxonomy