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L2_047_000G1_scaffold_2543

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_2543_1
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..499
DNA (498bp) protein (166aa)
DNA repair protein RecN n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC44_9ACTO
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
DNA repair protein RecN
L2_047_000G1_scaffold_2543_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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496..1641
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC45_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95704.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Thiamin pyrophosphokinase catalytic region
L2_047_000G1_scaffold_2543_3
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1638..2531
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U1N3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF78992.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L2_047_000G1_scaffold_2543_4
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2660..3304
DNA (645bp) protein (215aa)
Hydrolase, NUDIX family n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC49_9ACTO
NUDIX domain protein {ECO:0000313|EMBL:EWC95659.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
NTP pyrophosphohydrolase
L2_047_000G1_scaffold_2543_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3458..4153
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Actinomyces odontolyticus RepID=A7BC50_9ACTO
HTH domain protein {ECO:0000313|EMBL:EWC95669.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
transcriptional regulator
L2_047_000G1_scaffold_2543_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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4186..5631
DNA (1446bp) protein (482aa)
FeS assembly protein SufB n=1 Tax=Actinomyces sp. ICM39 RepID=J3J560_9ACTO
FeS assembly protein SufB {ECO:0000313|EMBL:EWC95680.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
FeS assembly protein SufB
L2_047_000G1_scaffold_2543_7
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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5631..6821
DNA (1191bp) protein (397aa)
FeS assembly protein SufD n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U1M9_9ACTO
FeS assembly protein SufD {ECO:0000313|EMBL:EFF78988.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
FeS assembly protein SufD
L2_047_000G1_scaffold_2543_8
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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6838..7590
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=3 Tax=Actinomyces RepID=A7BC53_9ACTO
FeS assembly ATPase SufC {ECO:0000313|EMBL:EJN46143.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
FeS assembly ATPase SufC
L2_047_000G1_scaffold_2543_9
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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7596..8873
DNA (1278bp) protein (426aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
SufS subfamily cysteine desulfurase (EC:4.4.1.16)
Cysteine desulfurase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J565_9ACTO
L2_047_000G1_scaffold_2543_10
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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8908..9384
DNA (477bp) protein (159aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Actinomyces sp. ICM39 RepID=J3J562_9ACTO
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EJN46131.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
iscU; putative iron-sulfur (Fe-S) cluster formation protein IscU
L2_047_000G1_scaffold_2543_11
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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9395..9826
DNA (432bp) protein (144aa)
PF01883 domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5D0_9ACTO
PF01883 domain protein {ECO:0000313|EMBL:EWC95810.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L2_047_000G1_scaffold_2543_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9962..11650)
DNA (1689bp) protein (563aa)
AMP-binding enzyme n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC57_9ACTO
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EWC95706.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
AMP-dependent synthetase and ligase
L2_047_000G1_scaffold_2543_13
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11702..12598)
DNA (897bp) protein (299aa)
Putative neutral zinc metallopeptidase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U1M3_9ACTO
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:EFF78982.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
putative metalloprotease
L2_047_000G1_scaffold_2543_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(12614..12718)
DNA (105bp) protein (35aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z567_9ACTO
Displaying 14 items

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