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L2_047_000G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_16_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(176..1159)
DNA (984bp) protein (328aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5C260 related cluster n=1 Tax=unknown RepID=UPI0003D5C260
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
L2_047_000G1_scaffold_16_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1177..1899)
DNA (723bp) protein (241aa)
UPI0003D65372 related cluster n=1 Tax=unknown RepID=UPI0003D65372
Maf-like protein Q618_VCMC00001G1149 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative nucleotide binding protein
L2_047_000G1_scaffold_16_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2110..3210
DNA (1101bp) protein (367aa)
UPI0003D5DA99 related cluster n=1 Tax=unknown RepID=UPI0003D5DA99
Adenylyl cyclase class-3/4/guanylyl cyclase {ECO:0000313|EMBL:ETI83567.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
adenylate/guanylate cyclase
L2_047_000G1_scaffold_16_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3271..3951
DNA (681bp) protein (227aa)
UPI0003D69585 related cluster n=1 Tax=unknown RepID=UPI0003D69585
Uncharacterized protein {ECO:0000313|EMBL:ETI83566.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
two component transcriptional regulator, winged helix family
L2_047_000G1_scaffold_16_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3979..5280
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D69B9A related cluster n=1 Tax=unknown RepID=UPI0003D69B9A
two-component system sensor histidine kinase
L2_047_000G1_scaffold_16_6
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5378..6658)
DNA (1281bp) protein (427aa)
lipopolysaccharide kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B34EE5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ23069.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
L2_047_000G1_scaffold_16_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6770..8452
DNA (1683bp) protein (561aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:ETI83563.1}; EC=2.7.11.17 {ECO:0000313|EMBL:ETI83563.1};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
serine/threonine protein kinase (EC:2.7.11.17)
UPI0003D5D107 related cluster n=1 Tax=unknown RepID=UPI0003D5D107
L2_047_000G1_scaffold_16_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8571..9476
DNA (906bp) protein (302aa)
UPI0003D5FFF0 related cluster n=1 Tax=unknown RepID=UPI0003D5FFF0
Uncharacterized protein {ECO:0000313|EMBL:ETI83562.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_000G1_scaffold_16_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10462..11502
DNA (1041bp) protein (347aa)
UPI0003D63434 related cluster n=1 Tax=unknown RepID=UPI0003D63434
Uncharacterized protein {ECO:0000313|EMBL:ETI83560.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
LacI family transcriptional regulator
L2_047_000G1_scaffold_16_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11525..12286
DNA (762bp) protein (254aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:ETI83559.1}; EC=1.1.1.- {ECO:0000313|EMBL:ETI83559.1};; EC=1.1.1.100 {ECO:0000313|EMBL:ETI83559.1};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
UPI0003D62516 related cluster n=1 Tax=unknown RepID=UPI0003D62516
L2_047_000G1_scaffold_16_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12283..13743
DNA (1461bp) protein (487aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6326A related cluster n=1 Tax=unknown RepID=UPI0003D6326A
Putative propionate CoA-transferase
L2_047_000G1_scaffold_16_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13799..14974
DNA (1176bp) protein (392aa)
Beta-ketothiolase BktB (EC:2.3.1.16)
UPI0003D6012A related cluster n=1 Tax=unknown RepID=UPI0003D6012A
Uncharacterized protein {ECO:0000313|EMBL:ETI83557.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_000G1_scaffold_16_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14989..16326
DNA (1338bp) protein (446aa)
UPI0003D62592 related cluster n=1 Tax=unknown RepID=UPI0003D62592
Uncharacterized protein {ECO:0000313|EMBL:ETI83556.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Transporter, MFS-type
L2_047_000G1_scaffold_16_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16395..17555
DNA (1161bp) protein (387aa)
glxK; glycerate kinase (EC:2.7.1.31)
UPI0003D592FC related cluster n=1 Tax=unknown RepID=UPI0003D592FC
Uncharacterized protein {ECO:0000313|EMBL:ETI83555.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_000G1_scaffold_16_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17635..19242
DNA (1608bp) protein (536aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.- 6.2.1.26)
UPI0003D63D88 related cluster n=1 Tax=unknown RepID=UPI0003D63D88
Uncharacterized protein {ECO:0000313|EMBL:ETI83554.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_000G1_scaffold_16_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19648..19872
DNA (225bp) protein (75aa)
UPI0003D6403E related cluster n=1 Tax=unknown RepID=UPI0003D6403E
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:ETI83553.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
antitoxin
L2_047_000G1_scaffold_16_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19869..20138
DNA (270bp) protein (90aa)
UPI0003D67D43 related cluster n=1 Tax=unknown RepID=UPI0003D67D43
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:ETI83552.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
plasmid stabilization system protein
L2_047_000G1_scaffold_16_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20296..20583)
DNA (288bp) protein (96aa)
UPI0003D65541 related cluster n=1 Tax=unknown RepID=UPI0003D65541
Uncharacterized protein {ECO:0000313|EMBL:ETI83551.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative transcription regulator
L2_047_000G1_scaffold_16_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20580..20888)
DNA (309bp) protein (103aa)
UPI0003D5F1E3 related cluster n=1 Tax=unknown RepID=UPI0003D5F1E3
Addiction module killer protein {ECO:0000313|EMBL:ETI83550.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
addiction module killer protein
L2_047_000G1_scaffold_16_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20995..21207)
DNA (213bp) protein (71aa)
UPI0003D627D6 related cluster n=1 Tax=unknown RepID=UPI0003D627D6
Uncharacterized protein {ECO:0000313|EMBL:ETI83549.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ATPase AAA
L2_047_000G1_scaffold_16_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21732..22016
DNA (285bp) protein (95aa)
UPI0003D632A1 related cluster n=1 Tax=unknown RepID=UPI0003D632A1
Virulence associated protein {ECO:0000313|EMBL:ETI83548.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
plasmid maintenance system antidote protein
L2_047_000G1_scaffold_16_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22437..22712
DNA (276bp) protein (92aa)
UPI0003D608C9 related cluster n=1 Tax=unknown RepID=UPI0003D608C9
Uncharacterized protein {ECO:0000313|EMBL:ETI83547.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_000G1_scaffold_16_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23098..24345
DNA (1248bp) protein (416aa)
UPI0003D5A151 related cluster n=1 Tax=unknown RepID=UPI0003D5A151
Uncharacterized protein {ECO:0000313|EMBL:ETI83546.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_000G1_scaffold_16_24
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24579..27155)
DNA (2577bp) protein (859aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B52C88
Uncharacterized protein {ECO:0000313|EMBL:EPD32462.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
LPXTG-motif cell wall anchor domain-containing protein
L2_047_000G1_scaffold_16_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27625..33369
DNA (5745bp) protein (1915aa)
UPI0003D6025A related cluster n=1 Tax=unknown RepID=UPI0003D6025A
Uncharacterized protein {ECO:0000313|EMBL:ETI83542.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fibronectin type III domain-containing protein
L2_047_000G1_scaffold_16_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33366..34334
DNA (969bp) protein (323aa)
UPI0003D59BF0 related cluster n=1 Tax=unknown RepID=UPI0003D59BF0
Uncharacterized protein {ECO:0000313|EMBL:ETI83541.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
AAA ATPase
L2_047_000G1_scaffold_16_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34339..35589
DNA (1251bp) protein (417aa)
UPI0003D603C2 related cluster n=1 Tax=unknown RepID=UPI0003D603C2
Uncharacterized protein {ECO:0000313|EMBL:ETI83540.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_000G1_scaffold_16_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35586..38171
DNA (2586bp) protein (862aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B77F22
Uncharacterized protein {ECO:0000313|EMBL:ETI83539.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
protease, transglutaminase-like protein
L2_047_000G1_scaffold_16_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38152..39603
DNA (1452bp) protein (484aa)
UPI0003D696CE related cluster n=1 Tax=unknown RepID=UPI0003D696CE
Serine/threonine protein kinase {ECO:0000313|EMBL:ETI83537.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
serine/threonine kinase
L2_047_000G1_scaffold_16_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39642..40367
DNA (726bp) protein (242aa)
UPI0003D5CA2B related cluster n=1 Tax=unknown RepID=UPI0003D5CA2B
Uncharacterized protein {ECO:0000313|EMBL:ETI83536.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
FHA domain-containing protein
Displaying items 1-30 of 230 in total

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