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L2_047_000G1_scaffold_174_31

Organism: dasL2_047_000G1_concoct_61_fa

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 27130..28002

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 290.0
  • Bit_score: 550
  • Evalue 1.30e-153
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 293.0
  • Bit_score: 248
  • Evalue 1.30e-63
UPI0003D62668 related cluster n=1 Tax=unknown RepID=UPI0003D62668 similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 290.0
  • Bit_score: 550
  • Evalue 9.50e-154

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGACGGCTCGATTCGTTTGCGCCTAGACCTGGCCTATCGCGGCGCACCGTTTCACGGTTGGGCACGCCAACCGGGTTTGCTGACCGTGCAAGGTCGCCTGGAAGAAGCGCTGACCCTGATTACCCGCCAGCCGGCGCAGCTTACCGTGGCCGGACGCACCGATGCGGGGGTGCACGCCCGCGGACAGGTTGCCCACTTGGACGTGCCGCAAGAGTTTTGGCTTTCCCTGTCCCGAGGGCGCGAGGAGAGCGACGAACTGCGCGGGGAACGGCTCCGGGCTCGTTTAGAAGGCTTAGCGGGACGCGGTTTGAACGGAGCTTTGGCAATAAAGCAGGTCAGGGTGGTATCTAGGGACTTTGATGCCCGTTTTTCGGCGCTGTCTCGCACCTACCGCTATCTGATTTGTGATGATCCCCGTGCCCAAGATCCTTGCCGCTTGGATATCGCCCGCACGTCCTCGCCCCTGAGGACGGAGAACATGCAGGTTGCGGCGCAAGCTTTGTGCGGTGAACACGATTTTCTGCCTTTCGCGAAACCTCGTGAAGGTGCCACTACAGTCCGCACCCTCCATTTCTTTAATATTTCTCGTCCCCACGATGGAATCGTGCAGGCGATGATTCGCGCCGACGCGTTCTGCCACTCTCAGGTACGGTTCATGATGGGGGCCTTAATCGAGATCGGGCGGGGTAAATATCAGCCTAACTGGGTAGGGGAGCTGCTAGCTGCGGGAGTACGTGACCAGCGGGTTCCGCTTGCCGATGGACGGGGTCTGACTCTTTGGGAGGTAGCCTATCCTCCGGAGGACGAATACGCCTTGCAAGCCCAAAAAGCTAAAGTGGTGCGCACCCTGCCCGAAAACTCGGCCTCTTAA
PROTEIN sequence
Length: 291
MDGSIRLRLDLAYRGAPFHGWARQPGLLTVQGRLEEALTLITRQPAQLTVAGRTDAGVHARGQVAHLDVPQEFWLSLSRGREESDELRGERLRARLEGLAGRGLNGALAIKQVRVVSRDFDARFSALSRTYRYLICDDPRAQDPCRLDIARTSSPLRTENMQVAAQALCGEHDFLPFAKPREGATTVRTLHFFNISRPHDGIVQAMIRADAFCHSQVRFMMGALIEIGRGKYQPNWVGELLAAGVRDQRVPLADGRGLTLWEVAYPPEDEYALQAQKAKVVRTLPENSAS*