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L2_047_000M1_scaffold_2272

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2272_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(200..1336)
DNA (1137bp) protein (379aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJX9_ALIFI
hypothetical protein
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AFL77297.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_2272_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1364..1771)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UWX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75606.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
oxidoreductase
L2_047_000M1_scaffold_2272_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1846..2316)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UWX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75606.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
oxidoreductase domain protein
L2_047_000M1_scaffold_2272_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2510..2887
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=3 Tax=Alistipes RepID=I3YJY0_ALIFI
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_047_000M1_scaffold_2272_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3058..3942
DNA (885bp) protein (295aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Malate dehydrogenase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJY1_ALIFI
L2_047_000M1_scaffold_2272_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4229..6532)
DNA (2304bp) protein (768aa)
TonB-dependent receptor n=1 Tax=Alistipes sp. HGB5 RepID=E4MDI7_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EFR56998.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
outer membrane receptor for ferrienterochelin and colicins
L2_047_000M1_scaffold_2272_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6617..6949)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YJY3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75610.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_2272_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7091..7600)
DNA (510bp) protein (170aa)
Transcription elongation factor GreA n=3 Tax=Alistipes RepID=I3YJY4_ALIFI
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_2272_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7863..9125
DNA (1263bp) protein (421aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=2 Tax=Alistipes RepID=I3YJY5_ALIFI
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:CCZ75612.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_2272_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9161..9772
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MDI2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56994.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_047_000M1_scaffold_2272_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9883..10704
DNA (822bp) protein (274aa)
Beta-barrel assembly machine subunit BamD n=3 Tax=Alistipes RepID=I3YJY7_ALIFI
Beta-barrel assembly machine subunit BamD
Beta-barrel assembly machine subunit BamD {ECO:0000313|EMBL:AFL77305.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_2272_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10707..11033
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJY8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77306.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_2272_13
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11046..12305
DNA (1260bp) protein (420aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Alistipes RepID=I3YJY9_ALIFI
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CCZ75616.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_2272_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12312..13955
DNA (1644bp) protein (548aa)
DNA repair protein RecN n=2 Tax=Alistipes RepID=I3YJZ0_ALIFI
DNA replication and repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_2272_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14031..14618
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJZ1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75618.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_2272_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14734..16365)
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=2 Tax=Alistipes RepID=I3YJZ2_ALIFI
chaperonin GroL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_2272_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16381..16650)
DNA (270bp) protein (90aa)
10 kDa chaperonin n=3 Tax=Alistipes RepID=I3YJZ3_ALIFI
Co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_047_000M1_scaffold_2272_18
unknown

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17062..17223
DNA (162bp) protein (54aa)

This feature has no annotations

L2_047_000M1_scaffold_2272_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17196..18413
DNA (1218bp) protein (406aa)
Site-specific recombinase phage integrase family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UWY5_9BACT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCZ75621.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
site-specific recombinase XerD
Displaying 19 items

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