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L2_047_000M1_scaffold_2307

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2307_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(284..1516)
DNA (1233bp) protein (411aa)
Transposon integrase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX3_9FIRM
Transposon integrase {ECO:0000313|EMBL:EFW04535.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative transposon integrase, Tn916 ORF3-like protein
L2_047_000M1_scaffold_2307_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1528..1779)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04534.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Excisionase from transposon Tn916.
L2_047_000M1_scaffold_2307_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1794..2027)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04533.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Excisionase from transposon Tn916.
L2_047_000M1_scaffold_2307_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2011..2241)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04532.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA binding domain, excisionase family
L2_047_000M1_scaffold_2307_5

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comp(2333..2596)
DNA (264bp) protein (88aa)
Excisionase from transposon n=2 Tax=root RepID=K1TKF6_9ZZZZ
Excisionase from transposon {ECO:0000313|EMBL:EKC70238.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Excisionase from transposon Tn916.
L2_047_000M1_scaffold_2307_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2547..3107)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04531.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Growth inhibitor
L2_047_000M1_scaffold_2307_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3212..3799)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04530.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Chromatin SPT2
L2_047_000M1_scaffold_2307_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4046..4234)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9VCK5_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY88109.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_047_000M1_scaffold_2307_9
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4231..4968)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I2Y1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE30935.1}; TaxID=423211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis (strain GZ1).;"
L2_047_000M1_scaffold_2307_10

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comp(4988..5239)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1R6C3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC44537.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_000M1_scaffold_2307_11
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5243..5542)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I2Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX72615.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L2_047_000M1_scaffold_2307_12
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5556..6791)
DNA (1236bp) protein (412aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=423211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis (strain GZ1).;"
DNA polymerase IV n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I2Y4_9CLOT
DNA-directed DNA polymerase
L2_047_000M1_scaffold_2307_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6944..7354
DNA (411bp) protein (137aa)
Helix-turn-helix n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DF61_CLOSC
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK76335.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_047_000M1_scaffold_2307_14

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7455..7988
DNA (534bp) protein (178aa)
Zn peptidase n=1 Tax=human gut metagenome RepID=K1UGP8_9ZZZZ
Zn peptidase {ECO:0000313|EMBL:EKC70571.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_000M1_scaffold_2307_15
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8146..8637
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZPT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15795.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
type I restriction modification DNA specificity domain protein
L2_047_000M1_scaffold_2307_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8573..9499)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WKQ7_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY88117.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
integrase-related protein
L2_047_000M1_scaffold_2307_17
unknown

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comp(9489..9626)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 17 items

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